Pseudoalteromonas carrageenovora: PC2016_1486
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Entry
PC2016_1486 CDS
T06565
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcar03032
]
PC2016_1486
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1486
Enzymes [BR:
pcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
PC2016_1486
DNA replication proteins [BR:
pcar03032
]
Prokaryotic type
DNA Topoisomerases
PC2016_1486
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
PC2016_1486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QBJ71706
LinkDB
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Position
I:1695263..1697962
Genome browser
AA seq
899 aa
AA seq
DB search
MTDLANEILPVNIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELSNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMAKMSHELLADLEKETVDFVPNYDGTEQIPDVLPTKVPNLLVNGSSGIAVGMAT
NIPPHNLTEVVNGCLALIQNPDLTIHELMDYIPGPDFPTAAIINGKKGIEQAYLTGRGKV
YMRARADIETDEKTGRETIIVHEIPYQVNKARLIEKIAELVKDKKIEGISALRDESDKDG
MRIVIEIKRGDVGEVILNNLYSQTQLQTVFGMNMVALINNQPKCFNLKEMLEEFIIHRRE
VVTRRTVFDLRKARDRAHTLEGLAIALANIDPIIDLIRKSPTPAEAKVALTARPWELGNV
QAMLEKAGEDNVARPDWLAAELGIRDGQYYISEQQAQAILDLRLHKLTGLEHEKILTEYQ
ALLDLIAELLYILATPERLMEVIRDELVEIKEQYGDERRTEINAAAHDISLEDLITEENV
VVTLSHEGYVKYQALSDYEAQRRGGKGKSATKMKDEDFIERLLVANTHDTILCFSTAGRL
YWLKVYQLPLASRAARGKPIVNLLPLEDDERITAILPVREYEDDKYIFMATAFGTVKKTP
LTAYSRQRASGIIAVNLNEGDSLIGVDITDGSNEIMLFTDAGKVVRFKEAEESAVVDEDG
NPVLDEQGNPEIRFKGVRPMGRTATGVRGIKMADDQRVVSLIVPKTDGAILTVTENGYGK
RTQLEDYPSKSRATQGVVSIKVSERNGAVVGAVQVDDNDEIMIISNRGTLVRTRVNEVST
VGRNTQGVILIRTIDEEQVVGLQRIEEIEVTESDLIDIEDVETVDAVIDEAVDDNPPSE
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctcgccaatgaaattctgccagtcaatattgaagacgagttaaaaaactcc
tacttagattacgcgatgagtgtaattgtaggacgtgcactaccagacgtacgtgatggt
ttaaaacctgttcaccgccgcgttttgtttgcaatgaacgagcttagtaatgattggaac
aagccttacaaaaaatcggcccgtgtggtcggtgatgtaatcggtaaataccacccacac
ggcgatagtgcagtttatgacacaatagtccgtatggcacagccattctctctacgttat
atgcttgtagatggccaaggtaacttcggttcggttgatggtgattcagcagcggcaatg
cgttatacagaagtacgtatggcaaaaatgtcgcatgagttattggccgatcttgaaaaa
gaaacggttgatttcgtacctaactacgatggcacagagcaaattcctgacgttttacca
acgaaggttcctaacttattagtaaatggttcatcaggtattgcggtaggtatggcgact
aacatcccaccacataacttaactgaagtggttaatggctgtttagcacttattcaaaat
cctgatttaactattcatgagttaatggattatatcccaggccctgacttcccaactgct
gcaattatcaacggtaaaaaaggcatcgaacaagcctatttaactggccgtggtaaagtg
tacatgcgtgcacgcgccgacatcgaaaccgatgaaaaaacgggtcgcgaaacaatcatc
gttcatgaaattccttatcaagtaaataaagcacgcttaattgaaaaaatagctgagctt
gttaaagataagaaaattgaaggcattagcgcattacgtgacgaatctgataaagacggt
atgcgtatcgtcattgagataaaacgtggtgacgtaggtgaagtaatattaaacaactta
tattctcaaacccagttacaaactgtgtttggtatgaatatggttgcgttaataaataat
caacctaagtgttttaacttaaaagaaatgcttgaagagtttattattcaccgccgtgaa
gtagtaactcgtcgtacagtatttgacttacgtaaagctcgcgaccgtgcacacacgctt
gaaggcttagcaattgcacttgctaacattgacccaataattgatcttattcgtaaatct
ccaacacctgctgaagctaaagttgctttaacagcgcgtccgtgggaattaggtaatgta
caagcaatgcttgaaaaagccggcgaagacaatgtagctcgtcctgattggttagctgcg
gagttaggtattcgtgatgggcagtactatatttctgagcaacaagctcaagcaatatta
gatttacgcttacacaagttaacaggtcttgaacatgaaaagattttaactgaatatcaa
gcgcttttagatttaattgctgaactattatacattttggctacacctgagcgtttaatg
gaagttattcgtgatgagctagttgaaataaaagagcaatatggtgatgagcgtcgtact
gagatcaacgctgctgcacacgatattagcttagaagatttaattactgaagaaaacgtc
gttgttacgctttctcacgaaggttatgttaagtatcaggcgttatctgattacgaagcg
cagcgtcgtggtggtaaaggtaaatctgcaacgaagatgaaagatgaagatttcattgag
cgtttattagtggcaaacacgcacgatacaatattgtgtttctcaactgcaggccgttta
tactggctcaaagtttaccagttaccacttgcaagtcgtgctgcgcgcggcaagccaatt
gttaacttattgccacttgaagatgatgagcgtattactgctatcttacctgtacgcgag
tacgaagatgataaatacatctttatggctacagcatttggtacagtgaagaaaacacca
cttacagcatacagtcgtcaacgtgcgagcggtattattgcggttaacctaaatgaaggc
gatagcctaattggtgttgatattaccgatggtagcaatgaaattatgttgtttactgat
gcaggtaaagttgtacgctttaaagaagctgaagagtcagcagtggttgatgaagacggc
aacccagtacttgatgagcaaggtaaccctgaaattcgtttcaaaggtgtacgtcctatg
ggccgtactgctaccggtgttcgtggtattaaaatggcagatgatcaacgcgtagtatcg
ttaattgtaccaaaaactgacggtgctattttaaccgttactgaaaatggttacggtaaa
cgtacacaacttgaagattacccatctaagagccgtgcaacacaaggtgttgtatctatt
aaggtgagtgagcgtaacggtgctgtagtaggtgctgtacaagttgacgataacgatgaa
ataatgattatttctaatcgtggtaccttagtacgtactcgcgttaatgaagtttctacg
gttggacgtaacacgcaaggtgttattttgatcagaactattgacgaagagcaagtagtt
ggtttacaacgtatcgaagagattgaagttacagaaagtgacttaattgatattgaagac
gttgaaacagttgatgcagttatagacgaagccgtggatgacaatcctccttctgaataa
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