Pseudoalteromonas carrageenovora: PC2016_1491
Help
Entry
PC2016_1491 CDS
T06565
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcar03032
]
PC2016_1491
03036 Chromosome and associated proteins [BR:
pcar03036
]
PC2016_1491
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1491
DNA replication proteins [BR:
pcar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PC2016_1491
Chromosome and associated proteins [BR:
pcar03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
PC2016_1491
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
PC2016_1491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
PqqD
HU-CCDC81_euk_2
VWA_3
Cac1_C
Motif
Other DBs
NCBI-ProteinID:
QBJ71711
LinkDB
All DBs
Position
I:1703086..1703373
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIETLAEQHAHVPVKDVENAVKEILEQMAGSLSTSDRIEIRGFGSFSLHFRAPRT
GRNPKTGDTVELEGKHVPHFKPGKELRDRVNESIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtcagaattgatagaaacacttgcggaacaacacgcacacgttccagtgaaa
gatgttgaaaatgcagtaaaagaaattcttgaacaaatggccggctcattatctacttcg
gatcgtattgagatcagaggttttggtagtttctctttgcatttccgcgctcctcgcaca
ggtcgtaaccctaagactggcgatacagttgagcttgaaggaaagcatgtacctcatttt
aaacctggcaaagaattgcgcgaccgcgtaaacgagagtattgcctag
DBGET
integrated database retrieval system
