Pseudoalteromonas carrageenovora: PC2016_1502
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Entry
PC2016_1502 CDS
T06565
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03030
DNA replication
pcar03430
Mismatch repair
pcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PC2016_1502
03430 Mismatch repair
PC2016_1502
03440 Homologous recombination
PC2016_1502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcar03032
]
PC2016_1502
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1502
Enzymes [BR:
pcar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PC2016_1502
DNA replication proteins [BR:
pcar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PC2016_1502
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PC2016_1502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
CAF1
Motif
Other DBs
NCBI-ProteinID:
QBJ71722
LinkDB
All DBs
Position
I:1715769..1716479
Genome browser
AA seq
236 aa
AA seq
DB search
MSNRSYNKANWEKKYQQNASKTRNIFLRHFYTHAFSDIKTPLKDVPFVALDFETTGLNSE
VDDIVSVGLVPFSLERVFCKQSKHWVVQPRKSLSEESIVIHGITHSEVDEAPDLASILGP
LLNALSGKIVVVHYAAIERHFLNNALLARISEGIEFALVDTMEIERKALHARQGLLGRLF
KSKLGSVRLNDCRKRYSLPAYHNHNALIDALATAELLMAQIQYHYRSDTTLSEILS
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaccgctcgtataacaaagctaattgggaaaaaaaatatcagcaaaatgcctct
aaaactagaaatatttttttaaggcatttttatactcatgcattcagtgatattaaaacc
cctctaaaagatgttccttttgtggctttagattttgagacgactggtctaaatagcgaa
gtggacgatattgtgagtgttggtttagtaccgtttagtttagagcgagtgttttgcaag
caaagtaaacactgggttgtacaaccccgaaagagcttaagtgaagaatccatagttatt
catggtattacccactcagaagtagatgaagctcctgacttagcctctattttagggcct
ttattaaatgcgttaagtggtaaaattgttgttgtgcattatgccgccattgaacgtcac
tttttaaataatgctttattagctcgtataagcgaaggaattgagtttgcattagtagat
acaatggaaatagaacgaaaagcgctacatgcacgacaagggttactagggcggttattt
aaaagtaagttaggctcagtaaggttaaatgattgtcgaaaacgctattcactgcctgct
tatcataatcacaatgcgttaattgacgcattagcaacggcagagctgttaatggcgcaa
attcaatatcattacagaagcgatacaacactgagtgagattttaagctaa
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