Pseudoalteromonas carrageenovora: PC2016_1733
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Entry
PC2016_1733 CDS
T06565
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PC2016_1733
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_1733
Enzymes [BR:
pcar01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
PC2016_1733
Transporters [BR:
pcar02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
PC2016_1733
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
RsgA_GTPase
ABC_ATPase
DEAD
AAA_16
MMR_HSR1
nSTAND3
DUF2207_C
Motif
Other DBs
NCBI-ProteinID:
QBJ71943
LinkDB
All DBs
Position
I:complement(1967151..1968896)
Genome browser
AA seq
581 aa
AA seq
DB search
MDQSTTQIYKRLISYVGDYKTVAIVAIIGMIGYSAMDALFIQLMKPFIDQGLNQRNTEVL
KYAPFVVIALVLGRGIFNFMSSYCLSYVGSQVVRSLRQQLFEHILHLPVSFHDKNSTGDL
ISKITFDTEQVQQAITKALLIVVREGAFVVFLLGVMFYTSWKLSLIFLVIIPLVAVIVAV
VSKRFRHISKNIQSAMGQVTRSSEQMLSGHKVIHGFGGQDQEVKHFSKINNHNRQQRIKM
DATKALSVSIIQILAASAMAVILWAVSLPSMIDTITSGDFMALIASMMMLLRPLKQLANV
NSDMQRGISAAQSIFLVLDEDIEKDTGTVSVDKVKGLIEVKSVTFKYPTKDEAVLNDLSL
TIKAGENIALVGRSGSGKSTISNLLPRYYDLQLPSEILLDGIPLQDYKLTDLRRQFALVS
QQVVLFNDTIANNICYGIQRNVSDKELDQVVKQAHVWEFVKDLPEQLNTMVGENGVMLSG
GQRQRIAIARAILKDAPILILDEATSALDTESEKLIQHALDTLMKDKTSIVIAHRLSTIE
NSDRIYVIDNGRVIESGDHNTLLANDGTYSALCKMQFGDQA
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaagtactacacaaatatataaacgtttgatttcttacgttggcgattacaag
actgtcgctatcgtcgcaattataggcatgattggatattcagcaatggacgctttattt
attcaattaatgaagccgtttattgatcaaggcttaaatcaacgtaatacagaagtttta
aagtacgcaccttttgtagtaatagcgttagtattagggcgtggtattttcaactttatg
tcttcttattgtttaagctatgtaggttcacaagtagttcgctctttgcgccaacagtta
tttgagcacatactccatttacctgtgtcctttcacgataaaaactcaaccggtgattta
atttcaaaaatcacttttgacacagaacaagttcagcaagcaattactaaagcgttactt
atagttgtacgcgaaggggcttttgtagtctttttactgggtgtaatgttttataccagt
tggaagctttcactaatatttttagtcatcattccacttgtagcggtaatagttgctgta
gtatctaaacgctttcgccacatatctaaaaatattcaatccgctatggggcaggttacc
cgtagttctgagcaaatgcttagcggccataaagtgattcatggatttggcgggcaagac
caagaagtaaagcacttttcaaagatcaataaccataaccgccagcagcgaattaaaatg
gatgcgacaaaagcgttaagcgtatcaattattcaaattttagcagcaagtgctatggcc
gttattttatgggccgtatcgctaccatcaatgattgatactattacgtctggtgatttt
atggcgcttattgcatctatgatgatgttacttcgcccacttaaacaacttgctaacgtt
aatagtgatatgcagcgtggtatttctgccgcgcaaagtatttttttagtgttagatgaa
gacattgaaaaagataccggcaccgtttcagtcgataaagttaaaggtttaattgaagtt
aagagtgtaactttcaagtacccaactaaagatgaagccgttttaaacgatttatcttta
acaattaaagctggtgaaaatatagcgttagttggtcgctcagggtctggtaaatcaact
atttcaaacttgttaccccgctattatgatttacagctaccaagtgaaattttgcttgat
ggtattcctctacaagattataaattaacagatttacgccgccaatttgctttagtatca
cagcaggtggtgctgtttaacgacacgattgcaaataacatttgttacggtattcaacga
aatgtatctgataaagaattagatcaagtagttaaacaagcccatgtttgggagtttgta
aaagatttaccagagcagcttaatacaatggtgggtgaaaacggtgtaatgctttctggt
ggtcaacgccagcgaatagctatagctcgcgcaattttaaaagatgcgccaattttaatt
ttagatgaagctacatctgcactagatacagaatctgaaaaattaattcagcatgcgctt
gatacattaatgaaagataaaacgtctattgtaatagcacacaggctttctactattgaa
aacagtgaccgtatttatgtaattgataatggtcgtgttatcgaaagtggtgaccataat
accttacttgctaatgacggcacttactcagcattatgtaaaatgcagtttggtgatcag
gcgtga
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