Pseudoalteromonas carrageenovora: PC2016_1950
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Entry
PC2016_1950 CDS
T06565
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PC2016_1950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1950
Enzymes [BR:
pcar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PC2016_1950
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PC2016_1950
RecFOR pathway proteins
PC2016_1950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
Mg_chelatase
AAA_16
AAA_3
AAA_14
nSTAND3
NTPase_1
Sigma54_activat
AAA_2
RNA_helicase
Rad17
AAA_17
TIP49
AAA_18
MCM
ABC_tran
Bac_DnaA
NB-ARC
Sigma54_activ_2
AAA_24
NPHP3_N
AAA_28
Resolvase
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
QBJ72153
LinkDB
All DBs
Position
I:complement(2226886..2227893)
Genome browser
AA seq
335 aa
AA seq
DB search
MIEADRLIDATEKTNEDTIDRAIRPKLLADYRGQPHVKQQMEIFIEAARSRGEALDHLLI
FGPPGLGKTTLANIVANELNVSIKTTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP
QVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPAFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYSVADLSHIVGRSAHYLDLEMCDDGATEIAKRSRGTPRIANRLLRRVRDYTQVKSDG
TVNANVAEQALDMIDVDKSGFDYMDRKYLLAIIEKFMGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFIQRTPRGRIVSDNAYHHFGLLPKQD
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcggatcgcttaattgacgcgactgaaaaaactaacgaagacaccatcgat
cgtgcaataaggccaaaactgttagccgactaccgaggtcagccacatgttaagcagcaa
atggaaatatttatagaagctgctcgtagccgaggcgaagcgctcgatcatttattaata
tttggcccgccaggcttaggtaaaacaacgcttgcgaacattgttgctaatgagcttaac
gtaagcattaaaacaacctcaggtcctgtacttgaaaaagccggcgacttagctgcgctg
cttaccaaccttgaagagggtgatgtactgtttattgatgaaatacacaggctaagccca
caagttgaagaaatactctatccagcaatggaagattaccaacttgatattatgataggt
gaaggcccagctgcgcgttctattaaattagatttacctgcatttacgcttattggtgcg
actacgcgagcaggatcgctaacgtcaccgcttagagaccgctttggcattgtgcagcgt
ctagagttttactcagtagccgacttatcacatattgtagggcgttcagcacattacctc
gatttagaaatgtgcgacgacggcgcaactgaaattgcaaagcgctcgcgtggtacgcca
cgtattgccaaccgtttacttcgccgcgtacgcgactacacacaagtaaagtcagacggg
acagtaaatgcaaatgttgctgagcaagcgcttgatatgattgacgttgataaaagcggc
tttgattacatggaccgtaaatatttactcgccattatagagaagtttatgggtgggccc
gttgggcttgataacttagcagccgccatcggtgaagaaaaagaaaccattgaagatgtc
atagagccttttttaattcagcaaggctttattcagcgtactccacgcgggcgaattgtg
tctgacaatgcttatcatcattttggtttactcccaaaacaagattaa
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