KEGG   Pseudoalteromonas carrageenovora: PC2016_1950
Entry
PC2016_1950       CDS       T06565                                 
Name
(GenBank) Holliday junction ATP-dependent DNA helicase RuvB
  KO
K03551  holliday junction DNA helicase RuvB [EC:5.6.2.4]
Organism
pcar  Pseudoalteromonas carrageenovora
Pathway
pcar03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    PC2016_1950
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pcar03400]
    PC2016_1950
Enzymes [BR:pcar01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     PC2016_1950
DNA repair and recombination proteins [BR:pcar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     PC2016_1950
    RecFOR pathway proteins
     PC2016_1950
SSDB
Motif
Pfam: RuvB_N AAA_lid_4 RuvB_C AAA AAA_5 AAA_22 Mg_chelatase AAA_16 AAA_3 AAA_14 nSTAND3 NTPase_1 Sigma54_activat AAA_2 RNA_helicase Rad17 AAA_17 TIP49 AAA_18 MCM ABC_tran Bac_DnaA NB-ARC Sigma54_activ_2 AAA_24 NPHP3_N AAA_28 Resolvase TsaE AAA_33
Other DBs
NCBI-ProteinID: QBJ72153
LinkDB
Position
I:complement(2226886..2227893)
AA seq 335 aa
MIEADRLIDATEKTNEDTIDRAIRPKLLADYRGQPHVKQQMEIFIEAARSRGEALDHLLI
FGPPGLGKTTLANIVANELNVSIKTTSGPVLEKAGDLAALLTNLEEGDVLFIDEIHRLSP
QVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPAFTLIGATTRAGSLTSPLRDRFGIVQR
LEFYSVADLSHIVGRSAHYLDLEMCDDGATEIAKRSRGTPRIANRLLRRVRDYTQVKSDG
TVNANVAEQALDMIDVDKSGFDYMDRKYLLAIIEKFMGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFIQRTPRGRIVSDNAYHHFGLLPKQD
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgattgaagcggatcgcttaattgacgcgactgaaaaaactaacgaagacaccatcgat
cgtgcaataaggccaaaactgttagccgactaccgaggtcagccacatgttaagcagcaa
atggaaatatttatagaagctgctcgtagccgaggcgaagcgctcgatcatttattaata
tttggcccgccaggcttaggtaaaacaacgcttgcgaacattgttgctaatgagcttaac
gtaagcattaaaacaacctcaggtcctgtacttgaaaaagccggcgacttagctgcgctg
cttaccaaccttgaagagggtgatgtactgtttattgatgaaatacacaggctaagccca
caagttgaagaaatactctatccagcaatggaagattaccaacttgatattatgataggt
gaaggcccagctgcgcgttctattaaattagatttacctgcatttacgcttattggtgcg
actacgcgagcaggatcgctaacgtcaccgcttagagaccgctttggcattgtgcagcgt
ctagagttttactcagtagccgacttatcacatattgtagggcgttcagcacattacctc
gatttagaaatgtgcgacgacggcgcaactgaaattgcaaagcgctcgcgtggtacgcca
cgtattgccaaccgtttacttcgccgcgtacgcgactacacacaagtaaagtcagacggg
acagtaaatgcaaatgttgctgagcaagcgcttgatatgattgacgttgataaaagcggc
tttgattacatggaccgtaaatatttactcgccattatagagaagtttatgggtgggccc
gttgggcttgataacttagcagccgccatcggtgaagaaaaagaaaccattgaagatgtc
atagagccttttttaattcagcaaggctttattcagcgtactccacgcgggcgaattgtg
tctgacaatgcttatcatcattttggtttactcccaaaacaagattaa

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