Pseudoalteromonas carrageenovora: PC2016_1968
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Entry
PC2016_1968 CDS
T06565
Name
(GenBank) transcriptional regulator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_1968
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC2016_1968
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
PAS_9
AAA_5
PAS_4
Mg_chelatase
AAA
HTH_8
AAA_2
AAA_3
PAS_3
AAA_16
AAA_22
MCM
PAS_8
AAA_7
AAA_19
bpMoxR
PAS_7
TIP49
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QBJ72168
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Position
I:complement(2246675..2248093)
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AA seq
472 aa
AA seq
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MIKQFLNDPKLLLNAVGEGIYGFDLSGNAVFVNPAAERMTGWKADELLGKKIHQYHHHSH
ADGTPYPADECQIYCTMFDGKRREIKNEVFWRKDGSSFAVEYTSTPVYRNDQLIGAVAVF
RDISAQQRTQNELHNALAQVKHLSEQLKDENSYLIAELNEDWQDSGLVGQSHIFQTMLEQ
IKLVSETDSTVLILGENGTGKELVARNLHRLSKRNNQAFIKVNCAAFTPSLLESELFGHE
KGAFTGASERRKGRFELANKGTLFLDEIAELPLEAQSKLLRVLQEQEFERVGGSTTLKVN
IRVIAATNRDLWQMVQKGSFRIDLYYRLNVFPITVPALKDRKEDIPYLCTNLITQLNKRL
GKQLSGLSKKAISQLQAYDWPGNIRELQNVLEREAILSKHQVLKLTQPLTLKDQHPINPA
LTLDEAQKQHIISVLELSHWQISGDKGAAAKLGLPESTLRSKMRKLGIKKSS
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgataaaacaatttttaaacgaccctaaactattacttaatgcggtaggtgaggggatt
tatggttttgacttatccggtaatgctgtatttgtaaatcctgcagctgagcgcatgacc
ggttggaaagccgatgaattgcttggtaaaaaaatacaccaataccatcaccacagccac
gcagacggcacaccttatcctgcagacgagtgccagatatattgcactatgtttgatggc
aaacgtcgcgaaatcaaaaatgaagtattttggcgaaaagacggtagctcatttgctgta
gagtacacatcaacgcctgtttatcgtaatgaccagctaatcggtgctgtagcggtattt
cgagatatatcggcgcagcagcgtacacaaaacgagttacataatgcacttgctcaggtt
aaacatttaagcgagcagcttaaagatgaaaacagttatttaattgctgagcttaatgag
gactggcaagactcagggttagttgggcaaagccatatttttcaaaccatgcttgaacaa
ataaagctagtaagcgagaccgacagtaccgtattaatacttggcgaaaatggcacaggc
aaagaattagtcgcacgtaacctgcaccgtttaagtaagcgtaataatcaagccttcata
aaagtaaattgtgctgcgtttacgcctagtttattagagtcggagctatttgggcacgaa
aagggcgcttttacaggcgctagcgaacgccgcaaaggccgctttgaactagctaataaa
ggcacattatttttagacgaaattgcagagctgccattagaagcgcaaagtaaattgtta
agagtgttacaagagcaagagtttgaacgcgttggcggcagcacaacacttaaagtaaac
attagggtaatagcggcaactaaccgtgatttatggcaaatggtgcaaaagggcagtttt
aggatcgatttatattaccggctcaatgtatttcctattacagtgcctgcgcttaaagac
cgaaaagaagacattccatatttatgcacaaatttaattactcagcttaacaagcgtctt
ggaaaacaattaagtggtttgagcaaaaaggcaattagccaattacaagcatatgactgg
ccaggtaatattcgcgagttacaaaatgtacttgaacgcgaagctattttatctaaacac
caggtacttaagttaactcagccgttaacactaaaagatcagcacccaatcaatccagcc
cttaccctcgatgaggcacaaaaacaacatattataagtgtacttgagctatcgcactgg
caaatatcgggcgataaaggcgctgctgctaagctgggcttgccagagagcaccctaaga
tcaaaaatgcgtaagctaggaattaaaaagagttcgtga
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