Pseudoalteromonas carrageenovora: PC2016_1971
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Entry
PC2016_1971 CDS
T06565
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_1971
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PC2016_1971
Archaeal homologous recombinant proteins
PC2016_1971
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF349
ubiquitin
Motif
Other DBs
NCBI-ProteinID:
QBJ72171
LinkDB
All DBs
Position
I:complement(2250196..2252877)
Genome browser
AA seq
893 aa
AA seq
DB search
MIFKHLFTPKWKHPKQQVRLEAIENLDVQRDATILNTLALEDNSAEIRRKALQKVNDLAL
WWKAYKQDQALKDVAEQQISNAVLSDESALSSHIKTEYIERFAPVKTLEKLAFAEKELQV
RVKLLKRLANPKLIEKAFKEGSEELQAHLVELVITHQLTKPLLKHAKGSAKQSLETHIEN
ERLAIEMPAQVEASTRVILAKLNALRDKTDYAIVNPQSSDLMAQWQALELKWLSADHVKT
LDAKYITITDKLDAHIAVLKEQHAKEQEKLALQQRQLLALATLEALSEEIENALQLGLET
PEQIQQDWLDAKVAQAKQSLSDSQLANNEQSKQVINKLEKLFIQVAKLPELTSAIKEYKL
AYAVLCDIQPAEQLSDYDDSLNTFNIAFKAARSHLNTLDGSLAQNFKTQLNANKKQFLAA
MSELTKPLEKNQSQAKRKARDVKRLIEEGRFNVAFGVFKGFEELFNTLTAHYQQPLVNIK
AELEAQLADAKDWQKYAAAPKREALLEEVTALVGEECTDPQQRADQVKTLRKRWNELGRL
DTEQEKQQGEQFDDKIEQLFAPCRSYFAEQEVAREAAKTQRETIIADMSALLSEPCTDDG
FDWKQYESQYNRLNKAWRSVGKVDPKTYRVLNDRYKKEQQQVLATLNAFHKANAAQKNEL
VEKAQQLSQSDDLASACQELKQLQQQWQTIGFAGLKAENALWQKFRQFNDDTFTKRSSEF
EEQKLAQNESDKQAAVELTELEDALDNVNQKAQLHDLETKVKGYAQYKSLTGKVNSLLEA
IEHKLALLNSQAEQANLDALFSAIENNDVLPSQYQTSLITSLSREQLLTRMEILANVSSE
NASLRMAEQVAMLDDKHRGEHADLNYYLKQLLALSKGSVEPETLAKIKTIFTA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgatctttaaacacctttttacaccaaaatggaaacacccaaaacagcaagttcgtcta
gaagcaattgaaaacctagatgtacagcgcgatgctacaattttaaatacactagccctt
gaagataattcggctgaaattcgtcgtaaagcactgcaaaaagtgaacgacttagcgctg
tggtggaaagcatataaacaagatcaagcgctaaaagatgttgctgaacaacaaatctct
aatgcagtattaagcgacgaaagcgcactgtcttcacatattaaaactgaatacattgag
cgttttgcgccagttaaaacacttgaaaaactagcatttgctgaaaaagagcttcaagta
cgcgttaagcttttaaagcgtttggctaaccctaaacttatcgaaaaagcctttaaagaa
ggcagcgaagagttacaagctcatttagtagagcttgttattacgcatcaacttacaaag
cctttattaaaacacgctaaaggcagcgctaagcagagcttagaaacacatatagaaaat
gaacgtttggcaatagaaatgccagcgcaagtagaggcttctacacgtgtaattttagcg
aagttaaatgcacttcgtgataaaacagactacgcaatcgttaatcctcaatcgagtgat
ttaatggcgcagtggcaagctctagagcttaaatggttaagtgccgatcatgttaaaaca
cttgatgctaagtacattactattaccgacaagcttgatgcacatattgcagtacttaaa
gagcaacatgctaaagagcaagaaaaactagctttacaacaacgtcagttacttgcgctt
gctactcttgaggctttaagtgaagagattgaaaatgcattacagctcggactagaaacg
cctgagcaaattcaacaagattggttagatgcaaaagtagctcaagctaagcaatcgcta
agcgattcacaacttgctaataacgagcaatctaaacaagtaattaataagctagaaaaa
ttatttattcaagttgctaagctaccagagcttacaagtgcaattaaagagtataaatta
gcctatgcggtactgtgtgacatacagccggctgagcaattaagtgattacgatgactct
ttaaatacctttaatatcgcgtttaaagctgctcgcagccatttgaatacacttgatggg
tcacttgcacaaaactttaaaacacagctaaatgctaacaaaaagcaatttttagctgct
atgagtgagttaactaagccacttgagaaaaatcaaagccaagcaaaacgtaaagcacgc
gatgtaaagcgcctaattgaagaaggccgttttaatgtagcatttggtgtttttaaaggc
tttgaagagctatttaatacactaactgcacattatcaacagccattagtaaatattaaa
gcagaacttgaagcgcaacttgcagatgctaaagattggcaaaaatatgcagcagcgcca
aagcgtgaagcactacttgaagaagtaacggctttagttggcgaagagtgtaccgatccg
caacagcgcgctgatcaagttaaaactttacgtaaacgttggaacgagctagggcgcctt
gatactgagcaagaaaagcaacaaggcgagcagtttgatgacaaaattgaacaattattt
gcgccttgtcgtagctactttgcagagcaagaagtagcgagagaagccgctaaaacccaa
cgtgaaactataattgctgatatgagcgctttactttcagagccttgcactgacgatggc
tttgactggaagcaatatgagagccaatacaatcgcttaaacaaagcatggcgcagtgta
ggtaaagttgaccctaaaacataccgcgtattaaacgatcgttacaaaaaagagcaacag
caagtacttgcaacacttaatgcgtttcataaagcaaatgcagctcaaaaaaatgaactc
gttgaaaaagcacagcaactatcacaaagcgatgatcttgcaagtgcatgccaagagcta
aaacagcttcaacagcaatggcaaacaataggctttgcaggcttaaaagctgaaaacgca
ctgtggcaaaagtttcgtcaatttaatgatgacacctttacgaaacgaagcagcgaattt
gaagagcaaaaacttgctcaaaacgaaagcgataaacaagctgcagttgaactgaccgaa
cttgaagatgcacttgataatgtgaatcaaaaagcgcaattgcatgacctagaaactaag
gtaaaaggctacgctcaatacaaatcacttacaggtaaagtaaacagcctacttgaagcg
atagagcacaagttagcattgcttaatagccaagcagaacaagctaatttagatgcacta
tttagcgccattgaaaataacgatgtattgccaagccaataccaaacatcgttaataaca
tcactgagccgtgaacaattactcactagaatggaaattttagccaacgtgagctcagaa
aatgcatcgcttagaatggctgaacaagttgcaatgctagatgataaacaccgtggtgaa
catgctgatttaaactattatttaaagcagttgttagcgctcagtaagggttcagttgag
cctgagacactagctaaaattaaaacaatttttacagcataa
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