Pseudoalteromonas carrageenovora: PC2016_2029
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Entry
PC2016_2029 CDS
T06565
Name
(GenBank) membrane-bound lytic murein transglycosylase D
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pcar01011
]
PC2016_2029
Enzymes [BR:
pcar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
PC2016_2029
Peptidoglycan biosynthesis and degradation proteins [BR:
pcar01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
PC2016_2029
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
LysM2_CERK1_LYK3_4_5
LysM_OapA
LysM3_NFP
DUF6172
LPAM_1
Motif
Other DBs
NCBI-ProteinID:
QBJ72229
LinkDB
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Position
I:2323829..2325409
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AA seq
526 aa
AA seq
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MNKSPLLITLALALSGCQTVTTLDSDSQVATQTNQKLEGASPNDINNALMVNAQYQQVNS
EDEEAPVFDDVWERIRYQLSIDVPQNRPVVTERNYYARHQAYLDRISKRAEPYLHFIVEE
VEKREMPIEIALLPIVESAFDPFGYSNRSASGIWQFMPATGERFDLKQNWWYDGRRDIVQ
STRAALDYLSYLHKTLEGDWLNAIAAYNSGEGRLMRAIKKNRKKHLPTDFWSLDLPSETT
AYVPKLLALADLLKRADDFNVKWQPVINAQVVEVVDVGSQIDLALAADMADMTLTELYRL
NPGFNRWATDPNGPHFLLLPTDKAEQFSQKLALTDVKDRLRWQQYTVARGDSLSVIAKKF
TTSSSAIRSLNKLKSNTIRVGQELLVPLTDGAINSEHLPKQMRLAANKATRTKLSHTVKS
GDTLWDISREYDVTMDELASWNKLKKNSVLRLNQKLTVYKSASKPQATASTNRTITYKVR
RGDSLARIASKFNLTVNEIIKWNNLAGQKYLQPGQKLKLKVDVRSS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgaataaatctcctcttttaattaccttggcgcttgcgctaagtggttgtcaaacggtt
acaaccttagattctgactctcaagtcgctactcaaacaaaccaaaagcttgaaggcgca
agccctaacgatatcaacaatgcattgatggtaaacgcacaatatcaacaagttaatagt
gaagacgaagaagctcccgtttttgatgacgtgtgggaacgtattcgttaccagctttct
attgacgtaccacaaaaccgccctgttgttaccgagcgaaattactacgctcgccatcaa
gcttatttagatcgtatttctaaacgtgcagagccttaccttcactttattgttgaagaa
gtagaaaaacgcgaaatgccaatagaaattgcattactccctattgtagaaagtgctttt
gacccatttggttactctaatagaagcgcttcaggtatttggcagtttatgccagcaaca
ggtgagcgttttgatttaaagcaaaactggtggtatgacggtcgtcgcgacattgttcaa
tcgacacgtgctgcacttgattacttatcatatttgcataaaacccttgaaggtgattgg
ttaaacgctattgcggcgtataactcaggcgaagggcgtttgatgcgcgcgattaaaaag
aatcgtaaaaaacatttaccaaccgatttttggtcactagatttaccaagtgaaaccaca
gcatacgtacctaagctattagcacttgccgatttattaaagcgtgctgacgactttaac
gttaagtggcaaccggtgatcaatgcacaagtagtcgaagtggttgatgtaggctcacag
attgatttagcgcttgctgctgatatggctgatatgacgcttactgagctttacaggtta
aaccctggctttaaccgctgggcaacggatcctaacgggccgcactttttattattacct
accgataaagcagagcagtttagccaaaaacttgcacttactgatgtaaaagatcgctta
cgctggcaacagtacactgtcgctcgtggcgatagcctttctgttattgctaaaaagttt
accaccagtagcagtgcaattcgctcgcttaacaaattaaaatcaaacactattcgcgta
ggccaagaactgttagtaccgcttaccgatggtgcaattaatagtgaacatttacctaaa
caaatgcgtttagcagcaaataaagcaactcgcactaagttatcgcacacggttaaaagt
ggcgatacactttgggatataagccgcgagtatgatgtaacaatggacgaacttgcgtcg
tggaataaactgaagaaaaactcagtactgcgattaaatcaaaagctaactgtctataaa
tcagcaagtaaaccacaagcaaccgcaagtactaatcgcaccattacctacaaagtacgc
cgtggtgactcgcttgcgcgtattgcttctaagtttaatttaacggttaatgagattatt
aagtggaataacttagccggccaaaagtatttacaaccgggccaaaagttaaagcttaaa
gtagacgtaagaagtagctaa
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