Pseudoalteromonas carrageenovora: PC2016_2045
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Entry
PC2016_2045 CDS
T06565
Name
(GenBank) Helicase
KO
K19789
DNA repair protein RadD
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_2045
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
PC2016_2045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
ERCC3_RAD25_C
AAA
SLFN-g3_helicase
AAA_22
ATPase_2
Zn_ribbon_3
Zn_Ribbon_1
UPF0547
AAA_30
DZR
zf-tcix
TniB
T1R_D3-like
KCTD18_C
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-ProteinID:
QBJ72245
LinkDB
All DBs
Position
I:complement(2340365..2342116)
Genome browser
AA seq
583 aa
AA seq
DB search
MSYKLRPYQQEAVERSVLHFRVTNDPAVIVLPTGAGKSLVIAELARIAKQKILVLAHVKE
LVEQNSQKYKSFGLEASIFSAGLKEKSLNHQVTFASVQSLSRNLNKLNEHYSLLIIDECH
RVNGDKKSQYGKVINALKEYNPQLKVLGLTATPYRLGMGWIYHHHYHGFVKGTKESPFRS
CIFELPLRYMIKHKYLTPPNEVDAAISHYDFSSLEANAFGQYTTDDMNALLKKSERATQA
ILKQVIKYSEEREGVMVFAATVMHAQEILSYLPAAQSALITGDTPNTERDKIIKQFKAKQ
LKYLVNISVLTTGFDAPHVDFIAILRPTESVSLYQQIVGRGLRLSESKTDCLVIDYAGNG
FNLFHPEVGDKKGDSDNEPVQVLCPGCGFANIFWGKTDSEGKVTEHFGRRCQGLLEDDAG
RKEQCDYRFRFKECEQCGAQNDIAARKCHDCGAVMADPDDKLRNALNLKDALVLRCSGLS
VVQLKDDLIKLTYFDEDGASCDEIYNLASKGGQFIFNKQFGKRVGHGQTPIDFKTAKQVI
KAQFDLVPPDFVIARKSKKYGWKVADKLFDYKGSFRKANQLSR
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgagctataaattaagaccttatcagcaagaagcagtagagcgtagtgttttacacttt
agagtaacaaacgatcctgcggtaattgtattacctactggtgctggtaaaagcctcgtc
atagctgaactcgctcgtattgcaaagcaaaagattttggtactggctcacgttaaagaa
cttgtagagcagaactcacaaaaatataaaagttttggtttagaggctagtatattttca
gcaggtttaaaagaaaaatcattaaaccatcaagtaacctttgccagtgtgcagtcttta
tcgcgtaatttaaataaactaaatgagcattattctttacttattatagatgaatgccac
cgagtaaatggtgataaaaaaagccagtacggtaaagttataaacgctttaaaggagtat
aaccctcagttaaaagtattgggtttaacggctacgccttatagattaggaatggggtgg
atataccaccatcattaccatggttttgttaaaggcacgaaagaaagcccatttagaagt
tgtatatttgagttaccgctgaggtatatgattaaacataaatacttaacgccaccaaat
gaagttgatgcagcaattagtcattatgatttttcgtctttagaggctaatgcgtttggg
caatacactactgacgatatgaatgcgcttttaaaaaagagtgagcgcgcaacgcaagct
atattgaagcaagtaataaaatatagtgaagagcgtgaaggtgttatggtctttgcggct
acggtaatgcacgcccaagagattttaagctatttacctgcagcacaaagtgcactaata
acaggtgataccccaaatactgaacgcgataaaattataaaacagttcaaagcaaagcag
ctcaaatacttggttaatatatcggtgttaacgactgggtttgatgcacctcatgtcgat
tttattgctattttaaggcctacagaatcagttagtttatatcagcaaattgtggggcga
ggactcaggttatctgaatcaaaaacggattgcttagtaatagattatgccggaaatggt
tttaatttatttcatcctgaagtgggcgataaaaaaggcgatagtgataacgagcctgtc
caagtgctttgccctggttgcggatttgctaatatattttggggtaaaacagactcagaa
ggtaaagtaactgagcactttggtaggcgttgccaaggcttactagaagatgatgcaggt
agaaaagagcagtgcgattatcgctttagatttaaagagtgtgagcaatgcggtgcacaa
aacgatattgcagcacgaaaatgccatgattgtggtgccgttatggcagaccctgatgat
aaactgcgtaacgcattaaatttaaaagatgcattggtacttaggtgtagtgggttatca
gtggtacaacttaaagacgatttaattaaattaacgtattttgatgaagatggcgcaagt
tgcgatgagatatataaccttgccagtaaaggtgggcagtttatctttaataagcagttt
ggtaaacgcgtgggccatggacaaacaccgatagactttaaaacggcaaaacaagttatt
aaagcgcagtttgacttagtccctcccgactttgttattgcacgaaaaagtaaaaaatat
ggttggaaagtggctgataaactatttgactataagggcagctttagaaaggcaaatcag
ttaagtcgttaa
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