Pseudoalteromonas carrageenovora: PC2016_2086
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Entry
PC2016_2086 CDS
T06565
Name
(GenBank) Transcriptional regulator, LysR family
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_2086
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
LysR family
PC2016_2086
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QBJ72284
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All DBs
Position
I:2393680..2394588
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AA seq
302 aa
AA seq
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MNIKQLKAFTEVATNLSFVEAATKLHLSQPALSLSIRNLEESLGGKLLSRTTRSLVLTQE
GKALLPVAKNILNQIDAAEREMKKRFSLELGHTSIAAMPSFAASVLPKIIKRFHSKYPHI
KLSVEDVLSDTVIDMVSDDLVELGISFEPKHNSDLVFHPLYKDQFIVVLPPSHPLTQSHT
ISWDELLKFELITLQSPSSVRELIEETLSQHNMTLNPAFDAHQLATVIRMVRDSLGVAIV
PALCKAQALEAGVVCRDINSPSIARRVGVISKPITSLSIAAKSMLETIKLYSSELTRQIE
LK
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgaatataaaacagttgaaagcatttacggaggttgcaactaacttaagctttgtagaa
gcggctacaaagttacacttatcacagccggcacttagtttaagcatcagaaatttagaa
gaaagcttaggtggaaaattattatcgcgaactacacgttctttagtgctgacacaagag
ggcaaggcattattacctgttgctaaaaatatattaaaccaaattgatgccgcagaaaga
gagatgaaaaagcggttttcacttgaacttggccacacctccattgctgctatgccgtct
tttgcagcttcagttttacctaaaataattaagcgatttcattctaagtatccacacata
aagctttctgtggaagatgtactctctgatacagtaattgacatggtaagtgacgactta
gtcgagctaggtatctcatttgaacctaagcataatagcgacttagtgtttcaccctttg
tataaggatcaatttattgtggtgttacccccttctcatccactgactcaatctcatact
attagctgggacgaattgctaaagtttgaattaatcactctgcaaagtccttcttccgtt
agagagttaattgaagaaaccttatcgcaacataacatgacgcttaacccagcatttgat
gcgcatcaattagcaaccgttataagaatggtgagggatagcttaggtgtggcgattgtg
cccgcactttgtaaagcgcaagcactggaagcaggcgtcgtatgcagagacataaactct
cccagcatagcacgacgcgtcggtgttatttcaaaacctataacctcattgtcaattgcg
gctaaatcaatgcttgaaaccattaaactctattcatcagaacttaccagacaaatagag
cttaaataa
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