Pseudoalteromonas carrageenovora: PC2016_2107
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Entry
PC2016_2107 CDS
T06565
Name
(GenBank) Transcriptional regulator, AraC family
KO
K18954
AraC family transcriptional regulator, transcriptional activator of pobA
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_2107
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PC2016_2107
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
RWP-RK
HTH_24
Cupin_6
Cupin_2
HTH_6
Motif
Other DBs
NCBI-ProteinID:
QBJ72305
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Position
I:complement(2415324..2416196)
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AA seq
290 aa
AA seq
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MKKNIPFYGLYGEPFIRQEPGDVHVEDIAFRSSELMWEISPHRHNKLAQIVIVFNNTWTA
RLDEKEYQLNGDWGVIIPAGVVHGFHFKPRTQGFVISIDDSFLISNHDETNLNQLLLNPL
TVEFENTARLAHLNHYIELLMYEINYNELGTSIAVEQLLKLILLNIYRQKNTTQFTSGAR
SREAEIVFNFRSLIELNYTSHMTIPEYAEKLHISTSKLNRICKSLLNDSPKAIVHQRLIT
EAKRRLIYTTQTIDEIALHLGFKDSAYFCRFFKLATSTTPTLFKQQSNTN
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacattccattttatggcttatacggagagccgtttattcgccaagagccc
ggtgatgtgcatgtggaagatatcgcttttcgaagtagtgaactgatgtgggagatatca
ccacatcgccataataaattagcacaaattgtcattgtatttaataacacttggacggca
aggttagatgaaaaagagtatcaacttaatggggattggggggtaattattccagcaggt
gttgtacatggctttcattttaaaccacggacacaagggtttgtaatttcaatagacgac
agttttttaataagcaatcatgatgagactaatctcaaccagttgttattaaatccatta
acggttgagtttgaaaatacagcacgtttagcccatttgaatcactatatagagctactc
atgtacgaaattaattataatgaattaggcacatctattgccgttgagcaattgctaaaa
ttgattttattaaatatttataggcaaaaaaatacgactcagtttacaagtggcgcccgc
agtcgagaagcagaaatagtctttaacttcagaagcttaattgagctaaattatacatcg
catatgactattccagaatacgctgagaaactacatatatctacttcaaagttaaaccgt
atttgtaaaagcttattaaatgattctcccaaagcgattgttcaccagcgtctgattact
gaggcaaagcgacgtttaatctatactacacaaacaatcgacgaaatagcacttcattta
gggtttaaagatagcgcgtatttttgccgttttttcaagttagccactagtacaacccca
acattattcaagcaacagtccaatactaactaa
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