Pseudoalteromonas carrageenovora: PC2016_2141
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Entry
PC2016_2141 CDS
T06565
Name
(GenBank) ATP-binding cassette, subfamily C, bacterial CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PC2016_2141
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_2141
Transporters [BR:
pcar02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
PC2016_2141
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
RsgA_GTPase
AAA_29
AAA_23
AAA_22
AAA_16
MMR_HSR1
nSTAND1
AAA_25
AAA_33
nSTAND3
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QBJ72335
LinkDB
All DBs
Position
I:2453559..2455331
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AA seq
590 aa
AA seq
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MTTNPRLDRAQQQSLRAFLKLQSKPAAMWLKLSIALGTFNAILMIAGAYLLAQTIHNVMF
EGESLAQVTHLLWPLAGIILLRALFLALSERLSAFAALKIKSAMRQTLLTKLTQLGPSYI
EQHGQGATLNTLHDGVEALHDYYAKYLPGVAYSALIPIAILVVIFPTDYKAGLIFLLTAP
LIPFFMILVGSKAEDLNQKRWKQLAVLGNYFFDRIQGLTQLKLFNATRTELKHIAKISDD
FRHATLDVLKIAFLSSFALEFLATISVALVAVIIGFRLFFGTLDFATGFVVLLLAPEFYL
PLRQLGSHYHARLQGISAAADMVTILNAPLPEQSQQNNAHVSEPINTISINNLNFTYPNS
NEGIKNINLALPNKGLVALVGASGSGKSTLFDCILGFHPQVVGQISINDKPLDATNINTL
QNKIAWIPQTPTLFYQSISDNIKIAKPDASQLELEQAAHQAGALDFINTLPNGFITLIGE
QGEGLSGGQKQRIALARAFLKQAPILVLDEPTAHLDSQTEQLIQRAINDYAKTHLVLVIA
HRLNTVKNANNIIVMQNGEVAQQGTYSHLAKQNGAFKTLLSTQVQGANND
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgacgactaaccctcgattagatcgcgcgcagcagcagtctctgcgcgcttttttaaag
ctacaaagtaaacccgctgcaatgtggttaaagttaagcattgcactgggtacttttaac
gctattttaatgattgcaggggcttacttactcgcccaaactattcataatgtaatgttt
gaaggtgaaagccttgctcaagtaacacatttactttggccacttgcaggcattatttta
ctacgagcgctttttttagcgctaagtgaaaggctaagtgcctttgctgcacttaaaatc
aaatcggctatgcgccaaaccttattaaccaaattaacccaattagggcctagctacatt
gaacaacatggtcaaggagcaacgcttaacactttgcacgatggcgttgaagcattgcac
gactattacgctaaatacttgcctggtgttgcttacagtgcccttattcctatagcaatt
ttggtggtgatttttccaaccgactataaagcgggtttaatatttttactaaccgctccg
cttattcccttttttatgattttagttggatctaaagctgaagatttaaatcaaaaacgt
tggaaacaacttgccgttttaggtaactacttttttgaccgcatacaaggtttaacgcaa
ctaaaactatttaatgccacccgcactgagcttaaacatattgctaaaatttctgatgat
tttagacacgccacactcgatgtattaaaaattgcttttttatcgtcatttgcgctggaa
tttttagccactattagcgtggcactcgttgcggtaataattggctttaggctatttttt
ggcacgctagattttgcaaccggttttgtagtgctgctacttgcacctgaattttattta
ccacttcgccaattaggtagccactaccacgctcgcttgcaaggtattagcgctgcagcc
gacatggtaactattttaaatgcgccgcttcctgaacaatcacagcaaaacaacgcccac
gttagcgagcctataaatacaataagcattaacaacttaaattttacatacccaaacagt
aatgaaggtataaaaaatataaacttagccctacccaataaaggcctagtagctttagtt
ggggcgagtggctcaggtaaaagcactttatttgattgcatattagggtttcaccctcag
gtggttgggcaaatcagtattaatgacaagccactagatgcaactaatattaatacgcta
caaaataaaattgcctggatcccgcaaacgccaacgctattttatcaaagcattagcgat
aacatcaaaatagcaaaaccagacgcttcacaattagagcttgagcaagcagcacaccaa
gctggcgctttagattttataaacacgttgcctaatggctttattacattgataggcgag
caaggcgaagggctttctggcggacaaaagcaacgtatcgcccttgctcgtgcattttta
aaacaagcgcctattttagtactcgatgaaccaacggcacaccttgatagccaaacagag
cagcttattcagcgtgcaataaacgattatgcaaaaacacatttggtactggttatagct
catagactcaatacagtaaaaaatgccaacaatattattgttatgcaaaatggtgaggta
gcacagcaaggcacatactcacaccttgctaagcaaaatggtgcgtttaaaacactgcta
agcactcaagtgcaaggagctaataatgactaa
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