Pseudoalteromonas carrageenovora: PC2016_2251
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Entry
PC2016_2251 CDS
T06565
Name
(GenBank) fatty-acid oxidation protein subunit alpha
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar00071
Fatty acid degradation
pcar00280
Valine, leucine and isoleucine degradation
pcar00310
Lysine degradation
pcar00362
Benzoate degradation
pcar00380
Tryptophan metabolism
pcar00410
beta-Alanine metabolism
pcar00640
Propanoate metabolism
pcar00650
Butanoate metabolism
pcar00907
Pinene, camphor and geraniol degradation
pcar00930
Caprolactam degradation
pcar01100
Metabolic pathways
pcar01110
Biosynthesis of secondary metabolites
pcar01120
Microbial metabolism in diverse environments
pcar01200
Carbon metabolism
pcar01212
Fatty acid metabolism
Module
pcar_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PC2016_2251
00650 Butanoate metabolism
PC2016_2251
09103 Lipid metabolism
00071 Fatty acid degradation
PC2016_2251
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PC2016_2251
00310 Lysine degradation
PC2016_2251
00380 Tryptophan metabolism
PC2016_2251
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PC2016_2251
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PC2016_2251
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PC2016_2251
00930 Caprolactam degradation
PC2016_2251
Enzymes [BR:
pcar01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PC2016_2251
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PC2016_2251
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PC2016_2251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DUF3316
Motif
Other DBs
NCBI-ProteinID:
QBJ72443
LinkDB
All DBs
Position
I:complement(2573339..2575561)
Genome browser
AA seq
740 aa
AA seq
DB search
MSDSVFNLTVDENKIAVVTINVPGEKMNTLRDSFADDLKALLEAAKQESVKGMVFISGKS
DNFIAGADVKMLDSVQKREDALAISELCHQAFFDMTKLPYTTVSAIHGAALGGGLEFALA
CDYRVGTDSDITKVGLPEVQLGLLPGGGGTQRLTKIVGIQKALEWMLTGKQIRPKQAKKA
GVLDDVVPQSVLLKVAKEFAAKKKPQDKEPRLDKVSKLLESNPFGRNFIFKKAKENVLKK
TGGHYPAPLAIIKAVRASVELDKLKAYKTEAESFATLVMSNESKALRSIFFATTEMKKEW
RNDYAPAISKTAVLGGGLMGAGIAHVSAVKAKVPVRIKDVAEQGISNAMNYTYKILDKRL
KRRIMSKADMQLTMNRITGTTDYSGFKHIDLVVEAVFEDLALKQGMVADIEQQCQSNTIF
ASNTSSLPISQIAAQAQRPENVIGLHYFSPVEKMPLVEIIPHEGTSQETIARVVNFARKQ
GKTPIVVKDMAGFYVNRILAPYVNEAANLMLAGEPIEKIDAALVEFGFPVGPLALLDEVG
IDIGSKIAPILEKELGERFKAPDAFSRMIDSKRLGRKTGRGFYEYDKKSKKVDESVYELL
GVTPAPRLNKSEIAKRCVSQMLNEAVRCLDDGIIASPRDGDIGAIFGIGFPPFLGGPFSY
MDKLGASKVSSDMSTLANSNANFAPCDTLVAMANSGATFYNVQTATDEPSSATIEEQVIH
AESSDKQNEESVVESPKQDS
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattcagtatttaatttaacggtagatgaaaacaaaattgccgtagtaaccatt
aatgtgccgggtgagaaaatgaacaccctgcgcgactcattcgctgatgacttaaaagct
ttacttgaagcggctaagcaagagtcagtaaagggtatggtatttataagtggtaaaagt
gataactttatcgcgggcgctgatgtaaaaatgcttgatagcgtgcaaaagcgtgaagat
gctttagcaattagtgagctttgtcatcaagccttttttgatatgacaaaactaccttat
acaacagtaagtgcaatacatggtgcggcgcttggtggtggtttagagtttgctttagcg
tgtgattaccgcgtaggcacagatagcgatattactaaagtaggccttcctgaagtacaa
cttggtttattgccaggtggcggcggtacgcagcgtttaactaaaattgtaggcattcaa
aaagcactagagtggatgctaacaggtaagcagattcgtcctaagcaagctaaaaaagcg
ggcgtattagacgacgttgtgccacaaagtgtattgttaaaagtcgctaaagaatttgca
gctaagaaaaagccacaggataaagaacctaggctagataaagtaagcaagttattagag
tcaaacccgtttggccgtaactttatctttaaaaaggcgaaagaaaacgtacttaaaaaa
accggcggacattacccagcaccgcttgcaattattaaggctgtgcgtgcaagtgtagag
cttgataaattaaaagcatataaaacagaggctgaaagctttgcaacacttgtaatgagt
aatgagtctaaagcgcttcgtagtattttctttgcaaccactgaaatgaaaaaagagtgg
cgcaacgattatgcgccggctattagtaaaacagccgttttaggtggtggcttaatgggt
gctggtattgcacatgtaagcgcagtaaaagccaaagtacctgtgcgtattaaagatgta
gcagagcagggcattagtaatgccatgaactacacctacaaaattttagataagcgcctt
aagcgccgtattatgtctaaagctgatatgcagttaaccatgaaccgtattaccggtaca
actgactacagcggctttaaacacattgatttagtagtagaagctgtatttgaagaccta
gccttaaagcaggggatggttgctgatatagagcagcaatgtcaaagcaatactattttt
gctagtaacacgtcatcactgcctatttcacaaattgcagcacaggcgcagcgtccagaa
aacgtgattggcctgcattacttctcgccagttgaaaaaatgccactagtggaaattatt
cctcatgaagggacttcacaagagaccattgcgcgtgtagttaactttgctcgtaagcaa
ggtaaaacgccaattgtggtaaaagacatggctggtttttacgtaaatcgtattttagcg
ccttatgtaaatgaagcggctaatttaatgcttgccggtgagccaattgaaaaaatagat
gcagcgcttgtagagtttggcttcccagtggggccgcttgctttacttgacgaagtaggg
attgatataggatctaaaattgccccaattcttgaaaaagaactaggcgaacgatttaaa
gcaccagatgcattttctcgtatgattgattcaaaacgcctaggccgtaaaacgggtcgt
ggtttttatgagtacgataaaaagagcaagaaagttgacgagtctgtctatgagctatta
ggtgtaacacctgcaccgcgtttaaataaaagcgaaattgctaagcgttgtgtatctcaa
atgcttaacgaagccgtacgttgtttagatgatggcattattgcaagcccacgtgatggc
gacattggcgctatatttggcattggcttcccaccgtttttaggtgggccgtttagctac
atggataaacttggcgcaagtaaagtaagctctgacatgtctactttagctaacagcaat
gcgaactttgctccgtgcgatacgttggttgcaatggcaaactcaggcgctacattttac
aatgtgcaaacagccactgatgagccaagctcagccacaattgaagagcaagtaatacac
gctgaatcttctgataagcaaaatgaagaaagcgtagtagagtcaccaaaacaagactct
taa
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