Pseudoalteromonas carrageenovora: PC2016_2358
Help
Entry
PC2016_2358 CDS
T06565
Name
(GenBank) Nif-specific regulatory protein
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar02020
Two-component system
pcar02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PC2016_2358
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
PC2016_2358
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_2358
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pcar02035
]
PC2016_2358
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
Other families
PC2016_2358
Bacterial motility proteins [BR:
pcar02035
]
Flagellar system
Flagellar assembly proteins
Others
PC2016_2358
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
Mg_chelatase
AAA_7
AAA_16
AAA
MCM
bpMoxR
TIP49
Motif
Other DBs
NCBI-ProteinID:
QBJ72549
LinkDB
All DBs
Position
I:complement(2685631..2687067)
Genome browser
AA seq
478 aa
AA seq
DB search
MILILDNNNNRSIGLNASLTFIGEAVQLLDESSFEQICSKYQQQECIVILGALQSLDHES
LIKRYPILPFLLIGETLKPLLSIANVVGLICEPFNHEVTTQLLHDCQQYQRMLPTDHKGH
KPHKSFDGLVGETDAVKDVRFLIEQVAKTDANVLILGESGTGKEVVARNVHLLSKRNTGP
FVPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAQGGTLFLDEIGDMPLQMQVK
LLRVLQERSYERVGGTKAIQADVRVIAATHRNLENMIEEGSFREDLYYRLNVFPIENPSL
SERADDIPLLLKELMRRVNEQSGTTAKFTERAVESLKEHAWPGNIRELANLVERMVIMFP
EKVVDVPDLPNKYRYIEVDAYEPEYPEELLEKDAFNDIFSTGFSDYDSEPEAEFNQQGSG
LLPEDGIELKDYLAELEISLITQALERFDYVVARAAEILGVRRTTLVEKMKKYNLSRD
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgatcttgattttagataataataacaatcgctcaataggattaaacgcatcacttacc
tttataggtgaggctgtacaattgctagatgaatctagctttgagcaaatatgcagtaag
tatcagcagcaagaatgcatagtcattttaggtgcattgcaaagcttagatcacgaaagc
ttaattaaacgctacccaatactcccttttttattaattggtgaaacacttaagccacta
ctaagtattgcaaatgttgtaggcttaatttgtgagccttttaatcacgaagtaaccacg
caattgctgcacgattgccagcagtatcaacgtatgttaccaactgaccataaaggccat
aaacctcataaatcatttgatggtttagtaggtgaaactgatgcagttaaagacgtacgc
tttttaattgagcaagtggctaaaaccgatgcaaacgtgcttattttaggtgagtcgggc
acaggtaaagaggttgttgcgcgcaacgtgcacttattgtctaagcgtaatacagggccg
tttgtgccggttaactgtggtgcaatacctggggagttgcttgaaagtgagttatttggg
cacgaaaaaggggcgtttacaggggctatatcggcgcgtaaaggacgttttgaacttgct
caaggtggtacactatttttagatgaaataggtgatatgccgctgcaaatgcaagttaag
ttactaagggtgttgcaagaacgcagctacgagagagtgggtggcacaaaagccatacag
gctgatgtgcgggttattgccgctactcaccgcaacctcgaaaacatgatagaagagggg
agttttagagaagatttatattatcgcttgaatgtattccctattgaaaacccttcgcta
agtgagcgcgctgacgacattccactgctattaaaagagttaatgcgccgtgttaatgag
caaagtggcaccaccgctaaatttacagaacgcgcggttgagagcttaaaagaacatgcg
tggccaggcaatattcgtgagcttgctaatttagttgagcgtatggttattatgtttcct
gaaaaggtggttgatgtacctgatttaccaaataaatatcgttacatagaagtcgatgcc
tacgagccagagtacccagaagagcttttagaaaaagatgcctttaacgatatttttagc
actggttttagtgattatgattctgaacccgaagctgaatttaatcaacaaggcagcgga
ttactacctgaagacggtattgagcttaaagactatttagcagagcttgaaattagctta
attacccaagcacttgaacgctttgattatgttgtggcacgcgcagcggaaatattaggt
gtaaggcgtacaacgctcgtcgaaaaaatgaaaaagtataacttgtcgcgagattag
DBGET
integrated database retrieval system
