Pseudoalteromonas carrageenovora: PC2016_2684
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Entry
PC2016_2684 CDS
T06565
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC2016_2684
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_2684
Enzymes [BR:
pcar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PC2016_2684
DNA repair and recombination proteins [BR:
pcar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PC2016_2684
Prokaryotic type
PC2016_2684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
BESS
Motif
Other DBs
NCBI-ProteinID:
QBJ72874
LinkDB
All DBs
Position
I:complement(3057359..3058021)
Genome browser
AA seq
220 aa
AA seq
DB search
MSDWSGFLQSELQQPYMLQTLDYVTKRREEGVAVYPPEQQVFSAFDATELNNIRVVILGQ
DPYHGEGQAHGLCFSVLPEVKKLPPSLKNMYKELATDITGFTIPAHGYLQSWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDNVIAHINEHCEGVVFILWGAHAQKKGKSINSARHHI
LKGPHPSPLSAHRGFFGCQHFSKTNDLLQSLGNKPINWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagcgattggtcaggctttttacaaagcgaattacagcagccctatatgttgcaaacc
ttagattatgtcactaagcgcagagaagaaggcgttgcagtttatccgccagagcagcaa
gtatttagtgcttttgatgcaacagaacttaacaacattcgagtggttattttggggcaa
gacccttaccacggcgaaggacaggcacatggtttgtgtttttcggtattgcctgaggtt
aaaaaactgccaccgtcgcttaaaaatatgtataaagagttagccaccgatattactggc
tttactattccagcacacggttacctgcaaagctgggcagaacaaggcgtatttttgctt
aatacggtacttactgttgagcaagggcaagcgcattctcataagcatttaggatgggag
caatttaccgataacgtaattgcgcacattaatgagcactgcgaaggtgtagtatttatt
ttatggggcgcacatgcgcaaaaaaaaggtaaaagtataaacagtgcacgtcatcatatt
ttaaaagggccgcatccttcgccgctttctgcacatcgaggtttttttggctgtcagcac
ttttcaaaaactaatgacttattacaatcactaggtaataaacccattaattggcaggtt
taa
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