Pseudoalteromonas carrageenovora: PC2016_2747
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Entry
PC2016_2747 CDS
T06565
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcar03021
]
PC2016_2747
Transcription machinery [BR:
pcar03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
PC2016_2747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QBJ72937
LinkDB
All DBs
Position
I:3128570..3131464
Genome browser
AA seq
964 aa
AA seq
DB search
MNFSLGQRWISDTESDLGLGTVVAIEGRQVSILFPASGENRVYSSAEAPVTRVAFNPGDV
IKSVEEWELEVESIEVQGELLCYVGSRVDTGEEAKLKETFLDHFIKFNKPQDRLFAGQID
RFDRYTLRYQTWQHQFERQQSPIKGLIGQRANLIPHQLYIAQEVGKRFAPRVLLSDEVGL
GKTIEAGMILHQQIISGRASRVLIVVPENLQHQWLVEMLRRFNLRFSIFDEERCDEAFAD
SPNVFDTEQLVLTSLEFLTKKKRWFEQATLADWDLLVVDEAHHLSINNGKPSTEYQRMAE
LSQDIPGLILLTATPDQLGHSSHFARLQLLDPDRFYDYDVFKEEEANYKDVAQAANQLLQ
EQALDDTAKATLIELLKETDITDILAKAQQGDLPARKEILNMLLDRHGTGRILFRNSRSG
IDGYPSRKLHAYPMALPKQYKTAMSVLGNMGGIQNAELSAHRALFPEKIFQEFEGESASW
GLFDPRVDWLIETLKTLKHEKVLLICAKAETAISLEQILREREAIKASVFHEDMSIIERD
RAAAFFADEYDNAQILLCSEIGSEGRNFQFSHHLVLFDLPLNPDLLEQRIGRLDRIGQTQ
DVNIHVPYFENTAQEVLLRWYNEGLDAFETTSTTGQLLYKEFREDLLEYISAHNCDEDEL
DPMLEQVAQQNAVLRKKMESGRDRLLELHSSGQGAADSLVTDIEKLDNQFELPSYMINVF
DTFGVSQEDKGENTIILKPTEHMLNASFPSLKEDGMTVTFDRDTALSQEDVHFISWDHPM
VQGTMDMICDDDFGSASVALLKNKKLPPGTFFVELIFVAEAMAPKVLQVGRFLPPTPIRI
LLDKAGNNLGENVAFDGFNQQLSAVGRQTASKLAGALQSAIHPMINNAKDMAQEKLEVIR
EASLTKMQSTLGEEQSRLEALKQINPNIRQEEITFFDKQRSELSTHIEKAQLQLDAIRLI
VVSH
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgaatttttccttaggtcagcgttggatcagtgatacagagtcagatttaggattaggc
accgtagttgccattgaaggccgtcaggtcagcattttatttcctgctagtggtgaaaac
cgtgtttattctagtgcagaagcacctgttacccgtgtggcatttaatcctggcgatgtg
atcaaaagcgttgaagaatgggaattagaagtagagtctattgaagttcagggggaacta
ctttgttacgtagggtcgcgtgttgataccggcgaagaagcaaagttaaaagaaaccttt
ttagatcattttattaagtttaataaaccacaagatcgtttatttgcaggccaaatagat
cgctttgatcgttatacacttcgctaccaaacttggcagcaccagtttgaacgccagcaa
tcacctattaagggcttaattggccagcgtgctaaccttattccgcatcagctttatatt
gcacaagaagtaggtaaacgttttgcaccacgcgtattactgtctgatgaagtaggccta
ggtaaaacgattgaagcaggcatgattttacaccaacaaatcattagtggccgtgcaagc
cgcgtacttattgttgtgcctgaaaacctacagcaccaatggttagtagaaatgctacgt
cgctttaacttacgtttttctatttttgatgaagagcggtgtgacgaagcctttgccgat
tcgccaaacgtatttgatacagagcagctagtgcttacaagccttgagtttttaactaag
aaaaaacgctggtttgaacaagcaacacttgctgactgggacttattagttgttgatgaa
gcgcaccacttaagcattaataacggaaaaccaagtactgaatatcaacgaatggctgaa
cttagccaagatattccaggccttattttacttaccgctacacctgatcaactaggtcat
agcagtcactttgcgcgcttacaactactcgacccagaccgtttttacgactacgacgta
tttaaagaagaagaagcaaattataaagacgtagcgcaagcggcaaatcagttattgcaa
gagcaagcactagacgatacagctaaagcgacacttatcgagctattaaaagaaacggac
attaccgatattcttgcaaaagcacagcaaggtgatttaccagcacgtaaagaaatactc
aacatgctgctcgatcgtcacggtactggccgtatattattcagaaacagccgtagtggc
attgatggctaccctagccgtaaactgcacgcctacccaatggcattaccaaagcagtac
aaaacagctatgtcggtactaggtaacatgggtggtattcaaaacgctgaactaagtgca
catcgcgctcttttcccagaaaaaatatttcaagaatttgaaggcgaaagtgcaagctgg
ggattatttgacccacgtgtagattggttaatcgaaacacttaaaacgcttaaacacgaa
aaagtactccttatttgtgccaaagccgaaaccgctattagccttgagcaaatacttcgt
gaacgcgaagcgattaaagcctcggttttccacgaagatatgtcgattatagagcgtgac
cgcgcggctgcattttttgccgacgaatacgacaatgcacaaatactattgtgttcagaa
attggctcagaaggtcgtaacttccagttctcgcatcatttagtgttatttgatttacca
ctaaaccctgatttacttgagcaacgtattggccgacttgaccgcataggtcaaacacaa
gacgtgaatattcacgtgccatattttgaaaacacagctcaagaagtattactgcgttgg
tacaacgaaggcctagatgcctttgaaactacatcaaccacaggtcagttattatataaa
gagtttcgcgaagatttacttgaatacatttcagcacataactgtgatgaagacgagcta
gatccaatgctagaacaagtggcgcaacaaaatgccgtgctacgtaaaaaaatggaaagt
ggacgagaccgtttattagagctacattcttctggccaaggtgctgctgactctctggtt
accgacattgaaaagctcgacaatcagtttgagcttccaagttacatgatcaacgtattc
gacaccttcggcgtaagccaagaagacaaaggcgaaaacacgattatattaaagccaaca
gagcatatgctaaacgcctcgttcccaagcttaaaagaagacggtatgacagtcacattc
gaccgtgacactgcactttcacaagaagatgtacattttattagctgggatcacccaatg
gtgcaaggcactatggacatgatttgtgacgacgactttggtagcgcatcggttgcactg
cttaaaaacaaaaaattaccaccgggtaccttttttgttgagttgatatttgttgccgaa
gcaatggccccaaaagtattgcaagttggtcgctttttaccgccaacacctattcgtata
ttacttgataaagcaggtaataacttaggtgaaaacgtagcgtttgatggctttaaccaa
caactttcagccgtgggtcgccaaacagcaagtaaacttgctggtgcactgcaaagtgct
attcacccaatgatcaacaatgcaaaagacatggcgcaagaaaaactagaagtgattcgt
gaagcctctttaactaaaatgcaaagtacgctaggtgaagagcaatctcgtttagaagcc
cttaaacaaattaacccgaatattcgccaagaggaaattactttcttcgataagcagcgc
agcgagctgagcacgcatattgaaaaagcgcagttacaacttgatgcaattcgcttaatt
gtggtttcgcactaa
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