Pseudoalteromonas carrageenovora: PC2016_2788
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Entry
PC2016_2788 CDS
T06565
Name
(GenBank) Transcriptional regulator
KO
K05799
GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_2788
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
GntR family
PC2016_2788
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GntR
FCD
MarR_2
MarR
TrmB
HTH_41
HTH_11
HTH_DeoR
HTH_24
HTH_Crp_2
Fe_dep_repress
HTH_36
Rrf2
HTH_20
HTH_28
HTH_IclR
B-block_TFIIIC
Motif
Other DBs
NCBI-ProteinID:
QBJ72978
LinkDB
All DBs
Position
I:complement(3178383..3179132)
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AA seq
249 aa
AA seq
DB search
MSLKIKAAKLSDVILQQLENMILEGSLAPGEKLPPERELAKQFEVSRPSLREAIQKLEAK
GLVTRRQGGGTFVKNQLEEGLTDPLFELISKHPESQFDLLEFRHALEGIAAYYAALRGTS
TDFTKVKQSFDKIALVNDDLQQKAKAINAFHFSVAEASHNVVLLHLVRGMQALLEQNVLQ
NLTVLLKKSDISSQLAQHRRLLMDAVIDGNPEQARLASNAHLAFIEEALLEAGKEHSRIE
RSLRRTKQN
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaaagattaaagcagcaaaattatctgatgttattttacagcaactcgagaac
atgattcttgaaggctctttagcaccaggtgaaaagttgccaccagagcgtgaactagca
aagcagtttgaagtgtctcgtccgtcattgcgtgaggcaatccaaaaacttgaagctaaa
ggtttagttacgcgtcgccaaggtggcggtacgtttgtaaaaaatcagcttgaagaaggg
ctaaccgatccgttatttgaactgatcagtaaacatcctgaatcgcaatttgatttacta
gaatttcgtcatgcactcgaaggcattgctgcttactatgcagcgctgcgcggaaccagc
accgactttaccaaagtaaaacaaagctttgataaaattgctttagttaatgacgattta
cagcaaaaagcaaaagcaataaatgcctttcattttagcgttgcagaagcttcgcacaat
gttgttttattgcatttggttagaggtatgcaagcgctgcttgagcaaaatgtactgcaa
aatttaactgttttattaaaaaaatcagatataagcagtcagttagcccaacacaggcgt
ttattaatggatgccgttattgatggcaatccagaacaagcccgcttagcaagtaatgcg
cacttagcgtttattgaagaagcattacttgaagcaggtaaagagcattcgcgaattgaa
cgtagtttaagacgcacaaaacaaaattaa
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