Pseudoalteromonas carrageenovora: PC2016_2796
Help
Entry
PC2016_2796 CDS
T06565
Name
(GenBank) Type IV pilus assembly protein tapB
KO
K02652
type IV pilus assembly protein PilB
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcar02044
]
PC2016_2796
02035 Bacterial motility proteins [BR:
pcar02035
]
PC2016_2796
Secretion system [BR:
pcar02044
]
Type II secretion system
Pilin secretion/fimbrial assembly protein
PC2016_2796
Bacterial motility proteins [BR:
pcar02035
]
Pilus system
Pilus assembly proteins
PC2016_2796
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T2SSE
MshEN
AAA_22
AAA_30
AAA_16
AAA_7
AAA_29
PhoH
AAA_14
AAA_19
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
QBJ72986
LinkDB
All DBs
Position
I:3186232..3187908
Genome browser
AA seq
558 aa
AA seq
DB search
MNINSPLLRKFITLGRIDADTVKAKQNEFASTAELISKCGKIDSLDLAEQCIDLFRVPYF
DLKDFDPASIPADLVKEKLIRKHHILPLVQKDRKVYIAASDPTDYGAFENFEFSTGLSCE
VVVVDYIQLDNKIEQLLDATGSLNLSDDEFKEFADLDTESAKETAPKDDDKDDAPIIVYI
NKILMDAIKKGASDLHFEPYEHKYRIRFRIDGILHEVASPPNTLSTKLSARIKVMSRLDI
AEKRKPQDGRIKLKITERKSIDFRVSTMPTLWGEKIVMRILDSSSAMLGIDVLGYEEEQK
KLYMDALAQPQGMILVTGPTGSGKTVSLYTGLNILNQPERNISTAEDPVEINLEGVNQVQ
INPKAEMTFANALRAFLRQDPDVVMVGEIRDLETAEISIKAAQTGHLVLSTLHTNSAPET
ITRLLNMGVPAYNVASSISLIIAQRLARRLCPKCKTPEQLPSEELSRQGFTAKQIEDMTL
YAPKGCDSCTDGYKGRVGIYEVMQITPEIAQIIMRGGNSLEIAEVSLKAGFNNLRLSGLR
KAADGLTSLAEINRVTNM
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgaatattaactcaccgttattgagaaaatttattacccttggccgtattgatgccgac
acggttaaagcaaaacaaaacgaatttgcctcaactgctgagcttatttctaaatgcgga
aaaatcgatagtctagatttagctgagcaatgtattgatttgttccgcgtaccctatttt
gatttaaaagactttgaccctgcatctattccagctgatcttgtaaaagaaaagctgatc
cgtaagcaccatattttaccgcttgttcaaaaagatagaaaagtatacattgccgcctca
gatcctactgattacggtgcctttgaaaactttgaatttagtacgggtttatcgtgtgaa
gtggtggtggttgattacattcaactcgacaataaaatagagcagttactagatgccact
ggtagcttaaatttaagtgatgatgagtttaaagagtttgccgatttagatacagaaagc
gcaaaagaaaccgctcctaaagatgatgacaaagacgatgcgccaatcattgtttacatc
aataaaattttaatggatgccattaaaaaaggcgcgtcagatttacactttgaaccgtac
gagcataaataccgcattcgctttcgtatagacggaattttgcatgaagtagccagccca
cctaatacgctttctactaagctttctgcacgtataaaagtaatgtcgaggctcgatatt
gctgaaaaacgtaaaccgcaagatggccggattaaattaaaaattactgaacgaaaaagt
atcgattttcgtgtaagtactatgccgaccctttggggcgaaaaaatagtaatgcgtatc
ttagactcatcaagcgctatgctaggcattgatgtactcggctatgaagaagagcagaaa
aaactctacatggatgcccttgctcagccacaaggcatgatactagttacaggtcctaca
ggttctggtaaaacagtatcactttatacaggcttaaatattttaaaccagccagagcga
aatattagtaccgcagaggatcccgtagaaataaacctcgaaggggttaaccaagtacaa
ataaaccctaaagccgagatgacttttgcaaacgcactgcgtgcatttttacgtcaagat
cctgatgtagtaatggtaggtgaaatacgtgaccttgaaaccgctgaaatatcaattaag
gcagcgcaaacgggtcacttagtgttatcaacactgcatacaaactctgctcccgaaacc
attacacgtttattaaatatgggcgtaccagcttataacgtggcaagctctattagctta
attatagcccagcgattagcgcgccgattatgtcctaagtgtaaaacgccagagcaacta
ccgagtgaagaactgtctcgccaaggttttacagctaagcaaattgaagatatgacactc
tacgcacctaaaggctgtgatagttgtaccgatggctataaaggccgtgtaggtatttat
gaagtaatgcaaattacgccagaaattgcacaaattattatgcgtggtggtaactcacta
gaaatagcagaggtttcccttaaagctgggtttaataatttacgcctatcgggtttacga
aaagccgccgatggtttaacgtctctggctgaaataaaccgcgtaactaatatgtaa
DBGET
integrated database retrieval system
