Pseudoalteromonas carrageenovora: PC2016_2812
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Entry
PC2016_2812 CDS
T06565
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcar03021
]
PC2016_2812
Transcription machinery [BR:
pcar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PC2016_2812
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
Motif
Other DBs
NCBI-ProteinID:
QBJ73002
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All DBs
Position
I:complement(3201361..3202224)
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AA seq
287 aa
AA seq
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MSKDLYAMALTVGQQSASMDGYLQAVSTIPMLKVEQEQELAKKLQEEGDLGAAKQLIMSH
LRFVAHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFV
LKNWRIVKVATTKAQRKLFFNLRKNKKRLGWFNQAEVSTVASELGVSEKEVREMESRMSG
QDMGFDLTGDDNDDAPTSTYSPVQYLTDGSADLADDVEQQQWQEQSHTRLFSALKTLDER
SQDIVSARWLSDDKATLQELAEKYSVSAERVRQLEKTAMKKLQSAMS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaagatttatacgcaatggcacttacagtcggacaacaaagcgcaagcatggac
ggttaccttcaagcggtaagcactattcctatgcttaaagttgagcaagagcaagagctt
gctaaaaagcttcaggaagaaggcgatcttggcgctgctaagcaactcattatgtcgcat
ttacgctttgtagcacatattgctaaaagctactcgggatacggcttaccacaagctgac
cttattcaagaaggtaatataggcctgatgaaagcggttaaacgttttgaccctacagta
ggtgtacgtttagtgtcgttcgcagtgcattggattaaagccgaaatccatgagtttgtt
ttaaaaaactggcgcatagttaaagttgcaaccacaaaggcacaacgtaaattgtttttt
aatcttcgtaaaaacaaaaagcgtttaggttggttcaatcaagctgaggttagcactgtt
gctagtgagctaggtgtgagtgaaaaagaagtacgtgaaatggaatcgcgcatgagcggc
caagacatgggctttgacctaacaggcgacgataatgatgacgcgcctacaagtacttac
tctccagtacaatatttaacagatggttctgccgatttagctgatgacgtagagcagcag
cagtggcaagagcagtctcatactcgtttatttagcgcacttaaaacgctagatgagcgt
tctcaagacattgtaagtgctcgttggttatctgacgacaaagcaacattacaagagctt
gctgaaaaatacagcgtatcggctgagcgtgttcgccagctagaaaaaacagcaatgaaa
aagctgcaaagcgctatgagctaa
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