Pseudoalteromonas carrageenovora: PC2016_2891
Help
Entry
PC2016_2891 CDS
T06565
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC2016_2891
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_2891
Transporters [BR:
pcar02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
PC2016_2891
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
QBJ73081
LinkDB
All DBs
Position
I:3285875..3287137
Genome browser
AA seq
420 aa
AA seq
DB search
MDRHKRSSLKKLATIGLTAGAITHVPYVFARKKVTLRVLGTHVTLQEAIRKQAMSDLGIN
IEFSPAGSATVLQKASMNPGSFDLYEQWSNSINVLWNAGSIQPIEKNRLSHFNEINSLTK
TGKLTENANIGAGDAPYKLLNVQDDGTLSAQESDSISFLPYVHNVDSFGYNTEFIKPGIA
YETESWSWLLDEANRGKVAIVNAPTIGLFDLALAAQSKGLIKFKNIGAMTRSELDRLFSI
LLDYKRQGHFSGYWNSVPESVEFMKSNRAHIESMFSPAVSALNSQNVNVRFAAPKEGYRG
WHGVMCLSSQTQGSVKDAAYDYMNWWLSGWPGAFIARQGYYISNPERSKSLLSQAEWDFW
YDGKKTPIDLLNTNGDVAIKAGEHRNGGSYIKRFSNVAVWNSVMPTYDYSLQKWYELISR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggatcggcataaacgctcctctttaaaaaagttagcaaccatagggttaacagcaggt
gctattacacatgtgccttatgtattcgcccgcaaaaaagtaactttaagagtgttgggt
acccacgtaactctgcaagaggccattcgtaaacaagccatgagcgatttaggtattaat
atagagttctcccctgcaggtagcgcaacggtgctacaaaaagcgtcaatgaatccaggc
tcttttgatttatacgagcaatggtcaaacagtataaacgtactttggaatgcgggctct
atacagccaatagaaaaaaatcgtttatctcactttaacgaaataaattctttaaccaag
actggtaaactcactgaaaatgcaaatatcggcgctggagatgccccttataaattactt
aacgttcaagacgatggtacgctaagtgcacaagaaagcgattccattagctttttaccc
tatgtacataatgttgactcctttggctataacactgaatttataaagcccggtattgct
tacgaaaccgagagctggagctggttactagatgaagccaatagaggaaaagttgcgata
gtaaatgcccctaccataggtttattcgaccttgctttagcagcacaaagtaaggggtta
attaaatttaaaaatattggcgcaatgacacgctctgagcttgaccggttattcagtatt
cttttagattataaacgccaaggtcactttagtggctattggaactcagtacctgagtct
gttgaatttatgaaaagtaaccgagctcacatagaaagcatgttctcgcctgctgtttct
gctttaaatagccaaaatgtaaatgtacgatttgcggctcctaaagaaggctatagaggt
tggcatggtgttatgtgtttatcgtcacaaacacaaggtagcgtaaaagacgcagcttac
gattacatgaattggtggctttcgggctggccaggcgcatttattgctcgacaaggttat
tatattagtaaccctgagcgttctaagagccttttatctcaagctgagtgggatttttgg
tatgacggtaaaaaaactccaattgatcttttaaataccaacggagatgtagctattaaa
gcaggagaacacagaaatgggggcagctacataaaacggtttagtaatgttgcagtatgg
aactctgtaatgcctacctacgactacagcttgcaaaaatggtatgagttgattagccgg
taa
DBGET
integrated database retrieval system
