KEGG   Pseudoalteromonas carrageenovora: PC2016_2902
Entry
PC2016_2902       CDS       T06565                                 
Name
(GenBank) hypothetical protein
  KO
K03666  host factor-I protein
Organism
pcar  Pseudoalteromonas carrageenovora
Pathway
pcar02024  Quorum sensing
pcar03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    PC2016_2902
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    PC2016_2902
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pcar03019]
    PC2016_2902
   03036 Chromosome and associated proteins [BR:pcar03036]
    PC2016_2902
Messenger RNA biogenesis [BR:pcar03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     PC2016_2902
Chromosome and associated proteins [BR:pcar03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    PC2016_2902
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: QBJ73092
LinkDB
Position
I:complement(3303511..3303774)
AA seq 87 aa
MAKGQSLQDPFLNALRRERIPVSIFLVNGIKLQGKIQSFDQFVILLENTVNQMVYKHAIS
TVVPARAVNFQGVQGDESTEEPEAGNF
NT seq 264 nt   +upstreamnt  +downstreamnt
atggcaaaaggccaatcgttacaagacccatttttgaatgcactacgtcgtgagcgcatt
ccagtatcaatctttttggtaaatggcataaaattacaaggtaaaattcagtcatttgac
caatttgttattttacttgaaaacaccgtaaaccaaatggtgtataagcatgcaatttca
acagttgtacctgctcgcgcagtcaacttccaaggtgttcaaggggatgagagcactgaa
gaaccagaagctggaaacttttaa

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