Pseudoalteromonas carrageenovora: PC2016_2973
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Entry
PC2016_2973 CDS
T06565
Name
(GenBank) Membrane protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_2973
Transporters [BR:
pcar02000
]
Other transporters
Pores ion channels [TC:
1
]
PC2016_2973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
OprF
Motif
Other DBs
NCBI-ProteinID:
QBJ73161
LinkDB
All DBs
Position
I:complement(3388009..3389070)
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AA seq
353 aa
AA seq
DB search
MKLKSLTIAIALAATSASTFAADKEEGFYIGAFGDYYDASWKNMRDQAGLDVNESTGWGV
EAGYRFSDYWSARLEYADMDFNAFDKVAGNRNNIDGERYGIDALYHLDGGPFYGLFGIKE
IDVVDDNTFLNAGVGYQHFITDGLFVNAETAVYQGLDRGYTDVGAKIGINYLFGQNAAPA
EPVQPAPEPEVVEVAVVPADSDNDNILDADDQCPNTPMEDAVDGTGCTLYEDREVTTSLL
VTFPHDSAEVGSQYFTDIASVSEFLKEHTDTTVLLEGHASAVGNANYNKMLSKKRADDVA
KELVKDGIDEDRITTVGLGEERLKNTANTKAAHAENRRVEAHVKSIERVKVKR
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgaaattaaaatcacttacaattgcaatcgcgttggctgcaactagcgcatctactttc
gctgctgataaagaagaaggcttctacattggcgcatttggcgattactacgacgcatct
tggaaaaacatgcgtgaccaagctggcttagacgtaaatgagtctacaggctggggtgtt
gaagctggttaccgtttcagcgattactggagcgcacgccttgagtatgcagacatggat
tttaacgcttttgacaaagtagctggcaatcgcaataatattgacggcgagcgttatggt
attgatgcactataccacttagatggtggtccattttacggattatttggtattaaagaa
attgatgttgtagatgacaacacattcttaaatgcgggtgttggttaccaacactttatt
acagatggtttatttgttaatgcagaaacagctgtataccaaggccttgaccgtggttac
acagatgttggtgcaaaaattggtattaactacttatttggtcaaaatgcagcgccagct
gagccggttcaaccagctccagagcctgaagttgttgaagttgcagtagttcctgctgat
agcgataatgacaacattttagatgctgatgaccaatgcccaaatacacctatggaagat
gctgtagacggtacaggttgtacattatatgaagaccgtgaagtaacaactagcctatta
gttactttcccacatgactctgcagaagtaggttcacagtacttcactgatatcgcatca
gtatctgagttcttaaaagagcatacagatacaacagttcttcttgaaggtcatgcatcg
gctgtaggtaatgcaaactacaacaaaatgctttctaaaaagcgtgctgatgacgtagcg
aaagaattagttaaagatggtatcgatgaagaccgtatcactacagtaggtctaggtgaa
gagcgtcttaagaatacagcaaatactaaagcagctcacgcagaaaaccgtcgtgtagaa
gcgcatgtaaaatctattgaacgtgtaaaagttaagcgttaa
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