Pseudoalteromonas carrageenovora: PC2016_3291
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Entry
PC2016_3291 CDS
T06565
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_3291
Enzymes [BR:
pcar01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PC2016_3291
DNA repair and recombination proteins [BR:
pcar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PC2016_3291
Prokaryotic type
PC2016_3291
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBJ73472
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All DBs
Position
II:complement(129576..130970)
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AA seq
464 aa
AA seq
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MNTLFWFRRDLRLFSNEALIQALNDGAKHAIFFVCEKQWHQHNTAPIQIDLLKRRVKYLQ
QQLADYGITLHVISAPYFSDCESKLIEFCQSNNVKHIVANTEYELNEVNRDKAILAKCDD
VGVTFTLYEGDLIAPAGSVKNQSNEMYKVFTPFKRAWLKQYQDIHFNLPTWPLEKSSVDV
KAEPLLKSDDGSEKWPVDDETLSKIVNGFIADKLTSYDDNRDIPSIKGTSGLSPYLALGI
VSTKQLLINIQQQYPDILTTSKSKTFTWINELVWREFYRHLISEFPKLSRGDNFNEKYNA
VKWRKNEDDFNAWCEGRTGYPLVDAAMLQLKQTGWMHNRLRMVVASFLTKHLLIDWREGE
KYFMKHLIDGDLASNNGGWQWAASTGCDAQPYFRIFNPITQSERFDPTGKFIRKYLPELK
NVPDKQIHFPHTYIASMGKTKDCYWPAIVDHKAARERALAAFKV
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacacattattttggtttaggcgcgatttgcgccttttttcgaacgaagcgttgatt
caggcgctaaatgatggcgctaaacacgccattttttttgtttgcgaaaagcaatggcat
cagcataacaccgcgccaattcaaatagacttacttaagcgacgagtaaagtacttacaa
cagcaactagctgattatggtattacgctgcatgtaattagtgcgccatactttagtgat
tgcgaatcgaagttaattgagttttgccagtcgaataacgttaaacatattgttgctaac
actgaatatgaattaaatgaagtaaatcgtgataaggcaattttagctaaatgcgatgat
gttggtgttacatttactctgtacgaaggggatttaattgcgccagcgggcagtgttaaa
aaccaaagcaatgaaatgtataaagtgtttactccgtttaagcgcgcatggctaaagcag
tatcaagacattcactttaatttaccaacgtggcctttagaaaaatcgtcagttgatgta
aaagctgaaccacttcttaaaagtgatgatggctctgaaaaatggcctgtagatgatgaa
acactctctaaaatagtgaatggttttattgctgacaaactaacaagctatgacgataac
cgtgatattccaagtattaaaggaacttcgggcttaagcccttatttagcgcttggtata
gtgagtacaaagcaactattaattaatattcagcagcaatatcctgatattttaacaacg
tcaaaaagtaaaaccttcacatggataaatgaacttgtttggcgcgaattttaccgacat
ttaatttcagagtttcctaagttatcgcgtggagataattttaacgaaaagtataacgcg
gtaaagtggcgtaaaaacgaagatgactttaatgcatggtgcgaaggtcgtacaggttac
ccacttgtagacgctgctatgcttcagttaaagcaaacaggttggatgcacaatcgttta
cgtatggttgttgcaagttttttaactaagcatttgcttattgattggcgtgaaggcgaa
aagtactttatgaagcatctaattgatggtgatttagcatctaataatggtggctggcaa
tgggctgccagtacagggtgtgacgctcagccgtattttagaatttttaaccctattacc
caaagtgaacgctttgatccaacaggtaagtttatacgtaagtatttgccagagcttaaa
aatgtgccagataaacaaattcactttccacatacttatattgcttctatgggtaaaacg
aaggactgttactggccggcaattgtagatcataaagctgcacgtgagcgtgcgttggct
gcttttaaggtgtga
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