Pseudoalteromonas carrageenovora: PC2016_3461
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Entry
PC2016_3461 CDS
T06565
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PC2016_3461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcar03000
]
PC2016_3461
03400 DNA repair and recombination proteins [BR:
pcar03400
]
PC2016_3461
Enzymes [BR:
pcar01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PC2016_3461
Transcription factors [BR:
pcar03000
]
Prokaryotic type
Helix-turn-helix
AraC family
PC2016_3461
DNA repair and recombination proteins [BR:
pcar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PC2016_3461
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
ArsA_ATPase
DUF6233
Motif
Other DBs
NCBI-ProteinID:
QBJ73636
LinkDB
All DBs
Position
II:complement(328026..329402)
Genome browser
AA seq
458 aa
AA seq
DB search
MNIQHWQKARQSRDARFDGLFYIAVKSTGIYCRPICPAPTAHEKNVTYYQFAHNAAQAGF
RPCIRCRPDSAPGSAAWQGTKTTALRAKQLIDQNDEHDCEKLAARLGISSRYLRRLFSQY
FGVSITQYRLFNQCHFAKKLIQETSLPLTQIAFASGFKSIRRFNDAFLQQLNIAPSKLRS
SDKPSSSSLKLTLPFRPPYNWQALHGFLAKRLIKPIEWLDDKSYGRTFTYASCKGSFNAR
FVERKNYFVVEIDIDNTLYLQQVINNIRRVLDLDADINLIESHLANNINNAFTLTHGLRI
PGIWSSFEAGIRAVLGQQVSVTAAHNLVTKLVNELGEQQGEQQGEQQGERVYFPSADRVA
KSEFTFFKMPQARKNALHNLAEFCALNPDCNDLEQWLSLKGIGPWTVNYAKLRGQSLPDI
LLDGDLGVKKAQAAATPFESENCAPFRSYLTFQLWQQL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcagcattggcaaaaggcacgtcaaagtagagatgcccgttttgatgggctt
ttttatattgctgttaaaagtacggggatatattgcaggcctatatgcccagctcccact
gcacacgaaaaaaatgtaacttattatcagtttgcacataatgctgcacaagctgggttt
agaccttgtattcgatgtcgtcccgacagtgctccaggcagtgctgcttggcagggcaca
aaaacgacagcgcttagagcaaagcagttaatagatcaaaacgatgagcacgactgtgaa
aagctagcagctcgcttaggaataagtagccgttatttaagacgactgttttctcaatat
tttggtgtgtctattacacaatatagattatttaatcagtgtcatttcgctaaaaaatta
attcaagaaacaagcctcccgcttacgcaaattgcgtttgcatcaggttttaaaagtatt
agacgttttaacgacgcttttttacaacaattaaatattgccccttctaagcttcgttca
agtgacaaaccatcaagttcttcacttaaactaaccttaccttttagacccccttataat
tggcaagcgttacatggttttttagcaaaaaggcttattaagccaatagagtggcttgat
gataaaagttatggtcgtacatttacctacgctagttgtaaaggaagttttaacgcgcgt
tttgtggaacgtaaaaattactttgttgttgagatagatatcgataacacgctttacctg
caacaagtcattaataatatacggcgcgtacttgatttagacgcagatattaatttaatc
gaaagtcatttagctaataatataaataacgcatttacactcactcatggtttaaggata
ccgggtatttggtcaagctttgaggccggaataagagcggtacttggtcaacaagtaagc
gttacagctgcacataatttagtaacaaaattagtgaatgaacttggtgaacaacaaggt
gaacaacaaggtgaacaacaaggtgaacgagtctactttccaagtgcagatcgcgttgct
aaaagtgagtttacattttttaaaatgccgcaagcgcgaaaaaacgcattgcacaactta
gctgagttttgtgcactaaaccctgattgtaatgatttagaacagtggctaagcttaaaa
ggaattggcccttggacggttaattatgcaaaattaagagggcaaagcctgcccgacata
ttactagatggggatttaggggtaaaaaaagcacaggctgcggcaaccccatttgagagt
gaaaattgtgctccttttcgttcttacttaacgtttcaactatggcagcaattataa
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