Pseudoalteromonas carrageenovora: PC2016_3498
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Entry
PC2016_3498 CDS
T06565
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
pcar
Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcar02000
]
PC2016_3498
Transporters [BR:
pcar02000
]
Other transporters
Pores ion channels [TC:
1
]
PC2016_3498
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
QBJ73673
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All DBs
Position
II:371888..374305
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AA seq
805 aa
AA seq
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MFKPSLLTLAISSAVSGVFLFPNAALAQEEVAANNKSLEVIEVTATRRSGSVQNAPLNIT
ALDADIMKDQNISELADVARWVPGLTITDQGGRSGSPIIVRGLNTNSSGPSSDGGTVSTY
INEIPVSVDMRLVDIERVEVLIGPQGTLYGAGTLGGAIRYMLKEPELDFTSLEVYGDMFQ
TQESDSLGGEGGFIVNLPIIEDELAVRASLNVYEDPGFIDYAYTVREPGVSLPDPDWSNA
DEVNNNIKNVEDANGETTTTGRISVRWKPSETFEGTLNYFYQNQDSEGRSIVHYNSLNDD
NGLSDIVGKYESAYRYEEPREKEDQLLSLELKADLGFAELVSATGISSFDADGQRDQTDL
LIRLDYGYEEFPAFSSFTREIEEEDTFTQEIRLVSQSDSDFNWIVGGFYNKTETEASSRE
FTPGFDQFAIDNFGGAQLRPDSLEYLELTKSKVTESALFGEVGYQVTEKLDITIGARFYE
YDVEAQAAFDFPLANTLYGDADPDAITVAYEKDEAGDNGNLFKFNAKYQFTNSVMGYVTV
SEGFRIGGSNLLAVCPDPIPENQQTGCGNADERLFDADTTTNYELGFKSTWFRSQLHFNA
ALFNIDWDDAQITGATDVGQLTYLSNAGSANAKGIEISSRAILSDSFSVYATYAYTKAEL
TSDAPFLFNADGTDGAEDGDRLPGSPEHQFSMGVNYQTDVFNDKTLDINYGLTAQSDVIS
KVGLHDNGETLPGYSLSNISAKLTADEWSTTLYIDNVFNKYAVTSVRRSDADITSANGAD
IQRNYGHYINRPLTVGVKFNYKFEI
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaaccaagcttgttaaccttggctatttcgagcgctgtatctggcgtattttta
tttcctaatgccgcacttgctcaagaagaagttgcagctaacaacaaatcgctcgaagta
atcgaagttacagcaacaaggcgcagtggctctgtgcaaaatgcaccgctaaatattaca
gcgctcgatgccgatattatgaaagatcaaaatatcagtgagcttgcggatgtagcacgc
tgggtacctggtttaacaattaccgatcaaggtggccgctcaggctctcctatcattgtt
cgtggtttaaacactaactcgtctggcccatcatcagatggcggtaccgtatcaacttac
attaacgaaattccggtttcggttgatatgcgcttggtagatatagagcgcgttgaagta
ttaattgggccacaaggcaccctttatggtgcgggcacattaggcggcgcaattcgttac
atgcttaaagagcctgagcttgattttacatcgcttgaagtttacggcgatatgtttcaa
acccaagaaagtgactctttaggtggcgaaggcgggtttattgttaaccttcctattatc
gaagatgaacttgcagtgcgtgcaagcttaaacgtatacgaagacccaggctttattgat
tatgcttacacagtgcgtgagccaggtgtatctctaccggaccctgattggagcaacgcc
gacgaagtaaacaacaatattaaaaatgttgaagatgctaacggcgaaacaactaccaca
gggcgtatttctgtacgttggaaaccaagcgaaacatttgaagggacacttaattacttt
taccaaaaccaagacagcgaaggccgctcgattgttcattacaacagtttaaacgatgat
aatggcttaagcgatattgtaggtaaatacgagtctgcttatcgttatgaagaaccgcgc
gaaaaagaagatcaattactaagcctcgagctaaaagcagacctaggttttgcagagcta
gtatcggctacgggtatttcaagctttgatgccgacggccaacgcgaccaaaccgatttg
cttattcgtcttgattacggctacgaagaatttccagcgttttcatctttcacgcgtgaa
attgaagaagaagacaccttcactcaagaaattcgcttagtgtctcaaagcgacagcgac
tttaactggattgtgggtggcttttacaacaaaacagaaaccgaagcatcaagtagagag
tttacgcctgggtttgaccaattcgctatcgataactttggtggcgctcagctaagacct
gactcattagaatacttagagcttacaaaaagtaaagtcactgagtctgcgctattcggc
gaagttggctaccaagttaccgaaaaattagatattaccattggtgcacgtttttacgaa
tacgatgtagaggcgcaagcagcatttgacttcccgcttgcaaatacactttatggcgat
gcagaccctgatgcaatcaccgttgcttacgaaaaagacgaagcaggcgataacggtaac
ttattcaaatttaatgctaaataccagtttactaattcagtaatgggttatgtaacagta
agtgaaggctttagaattggcggttccaaccttctagctgtttgccctgatcctatccct
gaaaaccagcaaacaggatgtggtaacgctgacgaaaggctttttgatgcagatactact
acaaactacgagttaggctttaaaagtacctggtttagaagccaactacactttaacgcc
gcgttattcaacatagattgggatgatgcacaaattacaggcgctacagatgtaggccaa
ttaacgtatctttcaaacgcaggcagcgcaaatgcaaaagggattgaaatttcttcccgt
gcgattttatctgactcattctcggtttatgcaacttacgcatacaccaaagcagagcta
acatcagacgcaccatttttgtttaatgctgatggcaccgatggcgcagaagacggcgac
cgtttaccgggctcgccagagcatcagttctcaatgggtgtaaactatcaaacagatgtg
tttaacgacaaaacccttgatattaactacggtttaaccgcacaaagtgatgtaatttca
aaagtaggtttgcatgacaatggcgaaaccctgccaggttacagcttaagtaatatttct
gctaagctaacggctgatgagtggtctactactttatacattgataacgtatttaataaa
tacgccgttacatcagtacgtcgttcagatgccgatataacatctgcgaacggtgccgac
atacaacgtaactacggccattacattaatcgcccactaacggtaggtgttaaatttaac
tataaatttgaaatataa
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