KEGG   Pseudoalteromonas carrageenovora: PC2016_3653
Entry
PC2016_3653       CDS       T06565                                 
Name
(GenBank) type VI secretion protein ImpA
  KO
K11902  type VI secretion system protein ImpA
Organism
pcar  Pseudoalteromonas carrageenovora
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcar02044]
    PC2016_3653
Secretion system [BR:pcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC2016_3653
SSDB
Motif
Pfam: ImpA_N GAS Peptidase_C12
Other DBs
NCBI-ProteinID: QBJ73824
LinkDB
Position
II:complement(546982..548097)
AA seq 371 aa
MFLFEEYISPISDTEVAGIDPRSDVSPTSTYYALKDLRNQLRAAERNALVDEEGISSLAR
DWLPLLEQCSKAIKTQSKDIEYLAWFIEALCRIHSFKGLAFGFKVAHNLLDNYFDELYPS
LDDDDEVSDKVSALVGLNGSAGEGTLIIPIKSIYLTDSASMESYSFWEYQQGYDISRLTD
EKREKKLNLGAVDYELIERSAAETSTEFFVTLKQDIENAIEQFALLSEVMDRVTGQPQPT
SNIKQALEVSLAAVEHVAADKLEAAEKAKAALNEVQEVVQSEDDEGQGVALQAVKVNNEI
NSRESAINKLKEIATFFRKTEPHSPMSYTIEQVIRWSELSLPELLNELITDSDARTGYFK
LSGIKISETEI
NT seq 1116 nt   +upstreamnt  +downstreamnt
atgtttttatttgaagagtatatttcccctatttcagacaccgaagttgcaggtattgat
cctcgctcagatgtgtctcctacgtcgacttattacgccttaaaagatttaagaaaccag
cttcgtgcagcagaaagaaatgcgttagttgatgaagaaggtatttcctcactagcaaga
gattggcttcctttattagagcaatgtagcaaagcaataaaaacacaaagcaaagatatt
gaatatttagcttggtttatcgaagccctttgtcgaattcatagttttaaaggtttggct
tttggttttaaagttgctcataacttgctcgataattattttgacgaactctatccgtct
ctcgatgacgatgatgaagtgtcagataaagtatctgccttggttggccttaatggttct
gcaggggaaggtacattaataatcccaattaaaagtatctatctgaccgacagtgccagt
atggagtcatattctttttgggagtatcagcagggctatgatatttctcgtttaacggat
gagaaaagagaaaaaaagcttaatctaggtgctgttgattatgagcttattgaaagaagc
gctgcagaaactagtactgaattttttgttactttaaaacaagacattgaaaacgcgatt
gagcaatttgccttattaagcgaagtaatggatagagtaacgggtcagccccagccaact
tcaaatataaaacaagcattagaagtaagccttgctgctgttgagcatgttgcagcagat
aagcttgaagctgctgaaaaagcaaaagcggcactaaatgaagtgcaagaagtggttcaa
agtgaggacgacgaaggtcaaggtgttgcattacaagctgtgaaagttaataacgaaatt
aactcaagagaaagcgcgattaataaactcaaagaaatcgctactttttttagaaagaca
gagccgcactcacctatgtcgtacaccatagaacaagtaattcgatggagcgaattgtcg
ctgcctgaattattaaatgaattaattacagatagtgatgctaggacggggtactttaag
ttgtctggcattaaaatcagcgaaactgaaatataa

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