KEGG   Pseudoalteromonas carrageenovora: PC2016_3657
Entry
PC2016_3657       CDS       T06565                                 
Name
(GenBank) type VI secretion protein
  KO
K11892  type VI secretion system protein ImpK
Organism
pcar  Pseudoalteromonas carrageenovora
Pathway
pcar03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pcar00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    PC2016_3657
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcar02044]
    PC2016_3657
Secretion system [BR:pcar02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   PC2016_3657
SSDB
Motif
Pfam: DotU OmpA
Other DBs
NCBI-ProteinID: QBJ73828
LinkDB
Position
II:complement(553340..554620)
AA seq 426 aa
MDETIIKPRPGRLGRDASNNTQVDNDPDKTVMSVEPVASSIPSNAKVSIFKNPLMEAATD
CFSLVISIRKSVEMTNLAALKHRCVEAIKRFEVEIRNQNLSKDVIKNSRYCLCAILDESV
LNSKWSSMEWADESLLSTFHKETFGGEYFYTLLDNALSQPEQHKAFLELQYHCLNLGFKG
KYRLDTVGDSKVEEYRSQMYHLLNQLDGPINNKLSPNWKQRVAAGVELRNQVPLWVIFSV
LGLLLLTVYLFINMKLNDDVTAVNDKLAIIHPLAEDQAIDKKDQQLLVLEQLLQTEIQMG
IVTIKKNIDRIRISINSESLFNQGDSKLLPSFQPILEKLALSLEGTKGRILITGHTDDTP
IRTDKYPSNWHLSLARATQVANSMAKSTNLSGRLWPEGKGAAEPIASNSDSASRSLNRRI
EIDLLF
NT seq 1281 nt   +upstreamnt  +downstreamnt
atggacgaaaccattataaaaccacgtcctggtcgattagggcgtgatgcctcaaataat
actcaagtagataatgatccagacaaaacagttatgtctgttgagcctgttgcaagcagt
attcctagtaatgcaaaggtatctatatttaaaaacccgttaatggaagcggcaacagac
tgtttttcattggttatttcaatcagaaaatcagttgagatgacaaacttggctgcgtta
aagcatcgatgtgttgaggctatcaaacgctttgaagtcgagattcgtaatcagaattta
tcaaaagatgtaatcaaaaactctcgttattgtttatgtgcaattttagatgagtctgtt
ttaaattctaaatggagctctatggaatgggctgacgaaagtttgctttcaacatttcat
aaagagacctttggcggtgagtacttttatactttgctagataatgcattgtctcagcca
gagcaacacaaagcctttttagagcttcagtaccactgtttaaatttaggttttaaaggt
aagtacaggctagatactgtgggtgatagtaaagtagaagaataccgctcacaaatgtac
cacctattaaatcaattagatgggccaatcaataataagctttctcctaactggaaacaa
agagtagccgctggcgttgaattaagaaatcaggtgccgctgtgggttattttttctgtt
ctgggtctacttttacttaccgtttatttatttataaatatgaagctaaatgatgatgtt
accgctgtaaatgacaagctggccatcattcaccctctagctgaagaccaagcaatagac
aaaaaggatcagcagctacttgttttagaacaactattacaaactgagattcaaatgggg
attgtaacgataaagaaaaatatcgataggatcagaatctctattaatagtgagagcctt
tttaatcaaggtgactctaaattattaccttcatttcagcctattttagaaaagctagca
ttaagccttgaaggaactaaagggcgtattttaataaccggccacacagacgacacacca
attagaactgataaatacccttcaaattggcacctttctttagcgcgcgcaacgcaagtt
gcaaactctatggctaaaagtacaaacctcagtgggcgtttatggcccgaaggtaagggc
gcagcagagcctattgccagtaattcagattcagcttctcggtcacttaaccgacgaatt
gaaatcgacttattattttaa

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