Pseudoalteromonas carrageenovora: PC2016_3984
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Entry
PC2016_3984 CDS
T06565
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pcar
Pseudoalteromonas carrageenovora
Pathway
pcar00061
Fatty acid biosynthesis
pcar00071
Fatty acid degradation
pcar01100
Metabolic pathways
pcar01212
Fatty acid metabolism
pcar02024
Quorum sensing
pcar04146
Peroxisome
Module
pcar_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pcar00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PC2016_3984
00071 Fatty acid degradation
PC2016_3984
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PC2016_3984
09145 Cellular community - prokaryotes
02024 Quorum sensing
PC2016_3984
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pcar01004
]
PC2016_3984
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pcar04147
]
PC2016_3984
Enzymes [BR:
pcar01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PC2016_3984
Lipid biosynthesis proteins [BR:
pcar01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PC2016_3984
Exosome [BR:
pcar04147
]
Exosomal proteins
Exosomal proteins of breast milk
PC2016_3984
Exosomal proteins of breast cancer cells
PC2016_3984
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBJ74150
LinkDB
All DBs
Position
pKCTC22325:complement(139685..141154)
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AA seq
489 aa
AA seq
DB search
MNYYNTHSASPLIIAHNKDLTREINGDEFNQQIQKVVKILQSFNNRGIAYKLDNTPAWLI
IDAATAVSNKVAVPIAHFFNEQQTQYVLAQCGANLFISDTLNPLLGEPVTSITVFELYTL
YIYEIVVAKPVSYFSETQKVTFTSGSTGQPKGVCLSAKSQMQVAQSLCDKISIKNPVHLC
LLPLAVLLENIAGVYAPLKSGGTVHLMSLNELGFVGTTLKQPAQLIAAINKVKPNTLILV
PELLACLVAFAEDGWQPPSSLQFIAVGGALVSEMLLTKARSLNLPVYQGYGLSEAASVVS
LNTPTNDNIHSAGSVLPHIQTKIENGQLFIKGDLFLGYLNHQPHNKNQWYATGDLVEQRQ
NTLFIKGRLKNLIITSMGRNISAEWPESLLLSQSGILQAVVFGEGRPFLSAIIYADTKLS
NPVLAQYINEINKQLPDYARIQKWHRLTAPLSVQQGLLTTNNRPKRDAISKQYHAVFDQF
YRLGEVINE
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaattactataatacgcattcagcatcgccattaattattgcccataataaagatcta
acacgtgaaattaatggcgatgagtttaaccagcaaatacaaaaagtagtaaaaatacta
caaagctttaacaacagaggtattgcttataagctcgataatacgccagcttggcttatt
attgatgctgctactgcagtttccaacaaagtggctgtgccaattgctcacttttttaat
gagcaacaaactcaatatgtactagcgcaatgcggcgctaatctatttattagcgacacg
ctaaaccctttacttggggagcctgttacctctattactgtgtttgagctttacacatta
tatatttacgaaatcgttgtagctaaacccgttagttatttttcagaaactcaaaaagta
acatttacatcaggctctactgggcaaccaaaaggcgtgtgtttatctgcaaagagccaa
atgcaggtagctcaatctctgtgcgataaaattagtattaaaaatccagttcatttatgt
ttattgccgctagctgtattgcttgaaaatatagctggcgtgtatgcccctttaaaaagt
ggcggtacagtacacttaatgtcattaaatgaattaggctttgttggaactacattaaaa
cagcccgcacagcttatcgctgctattaataaagttaagccaaatacgcttattttagta
cctgagctattagcatgcttagttgcttttgcagaagatgggtggcaaccgcctagttcg
ttacagtttattgcagtaggtggtgcgcttgtcagcgaaatgctattaaccaaagcgcgt
agcttaaacttaccggtgtaccaaggttatggcctttctgaggcggcatctgtcgttagt
ttaaatacacccacaaacgataacatccacagtgccggctctgtgttacctcatattcaa
accaaaattgaaaatggtcagctttttataaaaggcgatttgtttttaggttacttaaac
catcaacctcacaacaaaaaccagtggtatgcaactggcgatctagtagaacagcgtcaa
aatactttatttattaaaggccgattaaaaaatctaattattaccagcatggggcgcaat
atcagtgccgagtggcctgaatcactattactcagtcaaagcggtattttacaagccgtt
gtgtttggtgaggggcgaccttttctcagtgccattatttacgccgatacaaagctaagt
aacccagtgttagcgcaatacattaacgaaattaataaacaactacccgactatgcacga
attcaaaagtggcatcgtttaacggccccattaagtgtgcaacaagggttattaacaaca
aataatcgcccaaaacgagatgccataagtaagcaataccatgctgtatttgatcaattt
taccgacttggagaagtaattaatgagtga
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