Pseudomonas alvandae B21-020: LOY40_00175
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Entry
LOY40_00175 CDS
T08625
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03030
DNA replication
pcas03410
Base excision repair
pcas03420
Nucleotide excision repair
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LOY40_00175 (polA)
03410 Base excision repair
LOY40_00175 (polA)
03420 Nucleotide excision repair
LOY40_00175 (polA)
03440 Homologous recombination
LOY40_00175 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_00175 (polA)
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_00175 (polA)
Enzymes [BR:
pcas01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LOY40_00175 (polA)
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
LOY40_00175 (polA)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
LOY40_00175 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LOY40_00175 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
Obc1_cap
GPAT_N
Motif
Other DBs
NCBI-ProteinID:
UVM72634
LinkDB
All DBs
Position
34176..36944
Genome browser
AA seq
922 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSPFAVVFD
AKGGTFRDALYAEYKANRPSMPDDMRVQIEPLHASVKALGFPLLCVDNVEADDVIGTLAR
SSAAADRPVVISTGDKDMAQLVDGHITLVNTMTGSALDVAGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGLTELYSQLDIVATLPIRGAKTLAAKLEEHKEM
AFLSYELATIKTDVPLDVGLDDLQMGAPDHEKLAELYTLLEFKSWFEENQRDAKRAGQEI
VEVAEEQPGAAEAKYEVILDQARFDAWLAKLDKAPLFAFVTETNGGDAQHSQLVGLSFAV
APFEAAYIPLTHSYMGVPEQLDRDTVLKALKPLLEDPNKLKVGQHAKFETNILANCAIGG
DQDNGILVQGIAFDTMLESYVLDSTATRHDMDSLALKYLGQSKTDFQGIAGKGVKQLTFD
QISLELAGPYAAEDADVTFRLHQALQEKLAATPSLGKVLSEIEMPLMPVLARIERQGALV
DANLLGAQSVELGEKLVALEREAFAIAGEEFNLGSPKQLGVILYEKLGLPVLSKTAKGQA
STAEAVLAELAEQDYPLPKVLMQYRSLSKLKSTYTDRLPEQINSRTGRVHTNYQQAVAAT
GRLSSIDPNLQNIPIRTAEGRRIRQAFVAPKGYKLLAADYSQIELRIMAHLAKDEGLLHA
FRNDLDVHRATAAEVFGVELQAVTHDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQA
YIDRYFARYPGVLEYMERTRAQAAEQGFVETIFGRRLYLPDINAKNPALRKGAERTAINA
PMQGTAADIIKKAMVAVDRWLATSGLDAKVILQVHDELVLEVREDLVDQVSGEIRQHMSA
AATLDVPLLVEVGVGNNWDEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcccccctcgtcctggtggacggttcttcttatctgtaccgcgcctttcac
gcgctgccaccgctgaccacgtccaaaggcctgccgacaggcgcggtcaagggcgtgctg
aacatgctcaagagtctgcgcaagcagtacccggacagtccgttcgccgtggtgttcgac
gccaagggtgggacgtttcgcgatgcgctgtacgccgaatacaaggctaatcgcccgagc
atgcccgacgacatgcgggtgcagatcgagccgctgcacgccagcgtcaaggccctgggc
ttcccgctgctgtgcgtggacaacgtcgaggccgatgacgtgatcggcaccctggcgcgc
agcagcgcggcggctgaccgtccggtggtgatctccaccggcgacaaggacatggcgcag
ttggtcgatgggcacattaccttggtcaacacgatgaccggtagcgccttggacgtggct
ggcgtgaaggagaagtttggcgtcgctccggagcagatcatcgattacctggcgttgatg
ggcgattcgtccgacaacatcccgggcgttccgggcatcgggccgaagaccgcttccggc
ctgctggtgggcgtcaatggcggcctgaccgaactgtattcacagctggatattgtcgcc
acgctgccaattcgcggtgccaagaccctggccgccaagctcgaagagcacaaggaaatg
gccttcctctcctatgagctggcgaccatcaagaccgacgtgccgctggatgtcggcctc
gacgacctgcagatgggcgcgccggatcacgagaaactggccgagctttacaccttgctg
gagttcaagagctggttcgaagaaaaccagcgggacgccaagcgtgccggccaggagatc
gtcgaagttgccgaagaacagcccggcgctgccgaggccaagtacgaggtcatcctcgat
caggcgcgcttcgacgcatggctggcgaaactcgacaaggcgccgctgtttgccttcgtc
accgaaaccaacggaggcgatgcccagcattcgcaactcgttgggttgtcgtttgccgtg
gcccctttcgaagcggcgtatatcccgctgacgcattcctacatgggcgtgcccgagcag
ttggaccgcgacacggtgctcaaggcgctcaagccgctgctggaagatccgaacaagctc
aaggtcggccagcacgccaagttcgaaaccaatatcctggccaactgcgccatcggtggc
gaccaagacaacggcatcctggtccaaggcattgccttcgataccatgcttgaatcctac
gtgctggattccaccgcgactcgccacgacatggacagcctggcgctcaagtacctgggc
caaagcaagaccgacttccagggcatcgctggcaaaggcgtcaagcaactgaccttcgac
cagatatccctggagctggcggggccttatgccgccgaagacgccgacgtgaccttccgc
ctgcaccaggccttgcaagaaaaactggccgccacgccgagcctgggcaaggtgctcagc
gagatcgaaatgccattgatgccggtcctggcgcggatcgagcgccaaggggcgctggtc
gacgccaacctgctgggcgcgcagagtgtcgagttgggcgagaaactggtggcgttggag
cgtgaggcgtttgccattgccggcgaggaattcaacctgggctcgccgaagcaattgggc
gtcatcctgtacgaaaaacttggcctgccggtgctcagcaaaaccgccaagggccaggcg
tccaccgccgaagcggtgctcgccgagctggcggaacaggattacccgctgcccaaggtg
ctgatgcagtaccgctcgctgagcaagctcaagagcacctacaccgatcgcctgccggag
cagatcaacagccgcaccggacgcgtccataccaactaccagcaagccgtcgctgcgacc
ggacgcctgtcgtccatcgacccgaacctgcagaacattccgatccgcacggccgaaggt
cggcgcatccgccaggccttcgtcgcgccgaaaggctacaagctgctggcggcggactat
tcgcagatcgagctgcggatcatggcgcacctggccaaggatgaaggtctgctccatgcg
ttccgcaacgacctggatgtgcaccgtgccaccgccgccgaagtgttcggcgtcgaactg
caagccgtcacccatgatcagcgtcgcagcgccaaggcgatcaacttcggcttgatctac
ggcatgagcgcgtttggcctggccaagcagatcggcgttgatcgcaagcagtcccaggcc
tacatcgaccgctacttcgcccgttacccgggtgtgctggaatacatggagcgcacccgc
gcccaggcggccgagcaaggtttcgtcgaaaccattttcggtcgtcgcttgtacctgccg
gacatcaacgcgaagaacccggccctgcgcaaaggcgccgagcgcaccgccatcaacgcg
ccgatgcaaggcaccgcggctgacatcatcaagaaagccatggtggccgtggatcgctgg
ctggcgacctcagggctggatgcgaaggtgatcctgcaggtccacgacgaactggtcctg
gaagtgcgcgaagacctggtcgatcaggtgagcggggaaatccgccagcacatgagcgcc
gccgccacgctggacgtgccgctgttggtagaagtaggtgtgggcaataactgggatgag
gcgcactga
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