Pseudomonas alvandae B21-020: LOY40_00355
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Entry
LOY40_00355 CDS
T08625
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_00355 (rsmB)
Enzymes [BR:
pcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LOY40_00355 (rsmB)
Ribosome biogenesis [BR:
pcas03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LOY40_00355 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_25
PCMT
MTS
FtsJ
Methyltransf_31
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
UVM72670
LinkDB
All DBs
Position
75161..76471
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AA seq
436 aa
AA seq
DB search
MNPRLAAAKALAAVLSGKASLNSSLPTQLDKVEDRDRGFTQDLAFGTARWQPRLSALAAK
LLQKPFKAADADVEALLLVGLYQLLYTRVPAHAAIGETVGCADKLKKPWAKALINAVLRR
AQRESETLLAELEHDPVVRTAHPRWLQKSLKAFWPEQWEAICAANNAHPPMILRVNRRHH
TRDAYLALLGEAGIPAIPCQYSRDGIVLETPGDVRALPGFAEGWISVQDEAAQLAADLLE
LAPGQRVLDACCAPGGKTCHILEAEPKLAGVVAVDLEAKRLVRVKENLERLGLEAQLIAA
DGRDTAAWWDGKPFQRILLDAPCSATGVIRRHPDIKLTRQPDDIAALAVLQGELLDAMWS
TLEVGGMLLYATCSTLPTENTEVIEAFLARTPGARELDIATQAGLKQPHGRQLLAQEGGH
DGFYYAKLIKIAAARG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgcgtctggccgccgccaaggcacttgccgccgtcctcagcggcaaagcctcg
ctgaacagctccctgccgacccaactggacaaggtcgaagaccgcgatcgcggcttcacc
caggacttggcgttcggcaccgcccgttggcagccgcgcctctcggccctcgcggccaag
ctgttgcagaagccgttcaaggccgccgatgccgacgtcgaagcgctgctgctggtgggc
ctctatcaactgctctacacccgcgtcccggcccacgccgccatcggcgaaaccgtgggc
tgcgccgacaagctgaaaaagccgtgggccaaggccctgatcaacgccgtgctgcgccgc
gcccaacgggaaagcgaaaccctgctggccgaactcgaacacgacccggtggtacgcacc
gcccacccgcgctggttgcagaaatccctcaaggccttctggcccgagcaatgggaagcc
atctgcgccgccaacaacgcccatccgccgatgatcctgcgggtcaatcgtcgccaccac
acacgcgatgcctacctggcgttgctgggcgaggcgggtatcccggccatcccgtgccaa
tacagccgcgacggcatcgtcctggaaaccccgggcgatgtgcgcgcactgccaggcttc
gccgagggctggatcagcgtccaggacgaagccgcgcaactggccgccgacctgctggag
ctggcaccgggccaacgggtgttggacgcctgctgcgcaccggggggcaagacctgtcac
atcctcgaggccgagccgaaactggccggcgtcgtagccgtggacctggaagccaagcgc
ctggtgcgggtgaaggaaaacctcgaacgcctgggccttgaagcccaactgatcgccgcc
gatggccgcgacacggccgcctggtgggacggcaaaccgttccagcgcatcctcctcgac
gcgccatgctcggccaccggcgtgatccgtcgccatccagacatcaagctcacccgccag
ccggacgacatcgccgcactggctgtgttgcaaggcgaactgctcgacgccatgtggtcg
acccttgaggtgggcggcatgctgctctacgccacctgctcgaccttgccgacggaaaac
accgaagtgatcgaagccttcctcgcccgcacgccgggcgcccgggagctggacatcgcc
acccaggccggcctcaagcagccccatggtcggcagttgctggcccaggaaggcgggcac
gacgggttctattacgccaagctgatcaaaatcgccgccgcacgcggttaa
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