KEGG   Pseudomonas alvandae B21-020: LOY40_00600
Entry
LOY40_00600       CDS       T08625                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pcas  Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcas02044]
    LOY40_00600 (tssF)
Secretion system [BR:pcas02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   LOY40_00600 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: UVM72719
LinkDB
Position
124926..126713
AA seq 595 aa
MSFNHYFQSELTALRQSGRRFAERNPALAPYLGQAGQDPDVERLLEGVAFLTGRLRQKLD
DQLPELSHSLMQLLWPNYMRPLPAFSILQFDPLQWSGPALRVERDTPVESKPIQGVRCRF
RTCYPTEVSALDLTRVSHSVKGNGSVLGLRLQMHCEGNLGELQLGSLRLHLAGERYISQT
LYLNLLRNLEHFDVVLLDGDGQPVSATDGVPVTFRIPATRVQPVGFAEEHALVPYPLNTF
RGYRYLQEYFAFQEKFLFVDIDGLDVINGLPQALLEQARGLDLRFDIGNTGTQRIRPTLD
NVKLYCTPVVNLFKHDAQPIRLDGKQEDYLLLPAQYAPEHCGVFSVESVTGWSPGGLGYQ
AYVPFESFEHDASFDVPGNRAYYSIRHRPSLLHGGLDTCLSFDVRHKSGHETLSIELMCT
NQNLPRQLKPGDINQPGEKSPESLGFRNIGPVTQSFAPPLERDFLWKLISNMSLNYLSLA
DVNALKVILETYDFPRYYDEHSEKVSRRLLDGLKSIKHQPVDRLHRGLPVRGLCTELTID
PQGYIGEGDVFVFASVLNEFFALYASLNSYHELRVNSTQGEVYRWTPRMGQQPLL
NT seq 1788 nt   +upstreamnt  +downstreamnt
atgtcgttcaaccattatttccagagtgagctgactgcgcttcgccagtcgggccggcgt
ttcgccgagcgcaacccggccttggcaccttacctcggccaggccgggcaggaccccgat
gtggagcgactgttggagggggtcgcattcctgaccggtcgtcttcgccagaagctcgat
gatcaactgccggagttgagtcattcactgatgcaactgctatggccgaactatatgcgg
ccgttgccggcgttcagcattttgcagttcgatccgctgcaatggtcggggcctgcattg
cgcgtggagcgtgacacgccggttgagagcaagccgattcaaggggtacgttgtcgtttt
cgcacgtgttacccgaccgaggtgtcggcacttgatctgacaagggtcagtcactcggta
aaaggcaacggttcggtgctgggcctgcgcctgcagatgcattgcgagggcaatctgggt
gagttgcagttgggcagcctgcgcctgcacctggccggtgagcgttacatcagccagact
ctttatctcaatctgttacgcaatcttgaacatttcgatgtggtccttctggacggcgac
ggccagcccgtcagcgccacggacggagtgcctgtgacattcaggatccccgccactcgg
gttcagcccgtggggtttgctgaagagcacgcactggtcccgtatcccctgaataccttt
cgcggctatcgctacctgcaagagtatttcgctttccaggagaaattcctgtttgtcgac
atcgacggcttggacgtcatcaacgggttgccgcaagcgctgctggaacaggcgcgcggg
ttggaccttcgcttcgatattggcaataccggtacccagcggatacggccaacgctggat
aacgtgaagctttactgcacgcctgtcgtcaacttgttcaagcacgatgcccagccgatt
cgcctggacggcaagcaggaggattacctgctgttgccggcccaatatgcccccgagcac
tgcggtgtgttttcggttgaaagcgtcaccgggtggagcccgggcgggctggggtaccaa
gcctacgtgccgttcgaatcattcgagcatgacgccagtttcgatgtgcccggcaaccgc
gcctattacagcattcgccaccgcccgtcgctccttcatggtggtcttgatacgtgcttg
agttttgatgtgcggcacaaatcggggcacgaaaccctttcgatcgagctgatgtgtacc
aaccagaacctgccccgccagctcaagccaggcgacatcaaccagccgggcgaaaaaagc
cctgagtcgctcggcttccgcaatatcggcccggtcacccagagcttcgcgcctcccctg
gagcgcgatttcctgtggaaactcatcagcaacatgtcgctcaactacctgtcgctggcg
gacgtcaacgcgctgaaggtgatactcgaaacctacgatttcccccgctactacgacgag
cattcggagaaagtcagcaggcgcctgctggatggcctcaagtcgatcaagcatcagcct
gtcgatcggcttcatcgcggtctgccggtcaggggtttgtgcacagagctgacgatcgac
ccacagggatacatcggcgagggcgacgtgtttgtctttgcatcggttctcaatgagttt
ttcgcgctttatgccagcctgaattcgtatcacgagttgcgggtaaacagcacacaggga
gaggtgtaccgatggacaccccgcatgggccagcagccgcttctatga

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