Pseudomonas alvandae B21-020: LOY40_00610
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Entry
LOY40_00610 CDS
T08625
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
pcas03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
LOY40_00610 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_00610 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_00610 (tssH)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_00610 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
AAA_16
AAA_22
ClpB_D2-small
nSTAND3
NACHT
TniB
AAA_25
Sigma54_activat
AAA_29
AAA_18
Clp_N
T2SSE
AAA_24
Hpr_kinase_C
Sec3_CC
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
UVM72721
LinkDB
All DBs
Position
127693..130278
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AA seq
861 aa
AA seq
DB search
MINVDLQQLIQALDADTRRDLERSAERCVDRGAGKVLVEDLLQSLLERGQGLLGRALQDA
GISASELDATLQPRAEHGASRNPVFAPELIQWLQDALLLANLELGQSNVTEAALILALLR
NPGRHAGTHYQSLLARLNIDRLKAFALSRQAQQATGHAIAQGDSLLQRFTHNLTQQARDG
KLDPVLCRDGEIRQMIDILSRRRKNNPIVVGEAGVGKTAIVEGLALRIAAGAVPSGLEGV
EVLSLDMGLLQAGASMKGEFERRLNGVIEGVKTSPSPIILFIDEAHTLIGSGGNAGGSDA
ANLLKPALARGELRTIAATTWSEYKKYFEKDPALARRFQPVQLHEPTISEAVTILRGLAG
VYEASHGIYLRDDAVVAAAQLSARYLAGRQLPDKAVDVLDTACARVRISLAAAPQRLERL
RGELAEGERQRQALCRDAEAGLSIDAQALEALRVGLKAIEEECQCLEVQWTEQRVLAERL
LSLRRQLAGLRENRADKGLEIETLEAALHETHNALVDAQAEERLVSFEVCPRLVAEVINA
WTGVPLSQLACEHNVKIARFAADLRSRIRGQEPAVQTLDRAMRAAASGLNKPDAPAGVFL
LVGPSGVGKTETALALAELLYGGDRFITTLNMAEFQEKHTVSRLIGAPPGYVGFGEGGML
TEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGLANDGEGREIDFRNTLILMTSNLGS
ERISALCQNGAAPSAEQLEEAIRPLLSRHFKPALLARMRVVPYFPVSGSVLRELVEIKLG
RLGERLQRRQLGFSYCTQLVDYLVQRCTHSDSGARLIDQLLELHLMPGLSDGLLAAMAIG
EQPRQVHATLDEQARVTCEFK
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagaccttcagcaactcattcaggcgctggacgcggatacccgccgggac
ctggagcgttcggccgagcgatgcgtggatcggggcgcaggcaaggtcctggtggaagat
ctgttgcagagtctgctggagcgcggacaagggcttctcgggcgcgccttgcaggatgcc
gggataagcgcgagcgagctggacgccaccttgcaaccacgtgcggaacacggcgcttcg
cgtaacccggtcttcgcgccggagttgatccaatggcttcaggatgcgctgctattggcc
aatctcgaactgggccagagcaacgtcactgaagctgcgttgatcctggcgttgttgcgc
aacccaggtcggcatgccggcactcattaccaatcgttgctcgctcggttgaacatcgac
cggctgaaggccttcgccttgtcacggcaggctcaacaggcgactggacacgccattgct
caaggcgattcgcttctgcagcgcttcactcacaacctgacgcagcaggcccgtgacggc
aagctggatcccgtgctttgccgtgacggcgaaatccgccagatgatcgatatcctgtct
cgccgacgtaaaaacaatccgatcgtcgtcggtgaggcaggcgtgggcaagaccgccatt
gtcgaagggctggccctgcgcattgccgccggggcagtaccgtcagggcttgagggtgta
gaggtcttgtcgctggacatgggcctgctgcaggccggagccagcatgaaaggcgaattt
gagcggcggctcaacggggtaatcgagggtgtaaagacatcgcccagccccatcattctg
ttcatcgacgaagctcatacattaatcggctcgggtggaaatgcgggtggttccgatgcg
gccaacctgctcaagccggccctggcccgaggcgagctgcgcaccatcgcggcgacgact
tggagcgaatacaaaaaatatttcgagaaggatccagcccttgcccgtcgtttccaaccg
gtgcagttgcacgagccgaccatcagcgaggcggtgaccatcctgcgggggctggccggg
gtctacgaggcgagccacggtatctatctacgcgatgatgcggtggtcgcggcggcgcag
ttgtcagcacgctacctggcggggcgtcagttgccggacaaggcggtcgatgtgctggat
accgcatgcgcccgtgtgcgcatcagccttgctgccgcgccgcaacgccttgagcgcctg
cgtggcgaattagccgaaggtgagcgccagcgccaggcgttgtgtcgcgatgcagaggcc
ggcttgtcaatcgatgcccaggcattggaagcgctgcgggtaggactgaaggccatcgaa
gaggaatgccaatgcctggaagtccaatggacagagcagagagttctggccgaacgtttg
ttatcgctgcgccggcaactggctggactgcgggaaaatcgggcggacaagggcctggag
atcgaaacgctggaagcggcgttgcatgaaacccacaacgccttggtggatgcacaggcc
gaagaacgcctggtcagttttgaggtgtgcccgcgcttggtggcggaagtgatcaatgcg
tggacgggtgtcccgctgtcgcagctggcctgcgagcacaacgtgaaaatcgcccgtttc
gcggcagatctacgcagccgaatcagggggcaggaaccggcggtgcagacgcttgatcga
gcgatgcgcgcagccgcctcaggcttgaacaaacccgacgccccagcgggtgtgtttttg
ctggtagggccgagtggggttggcaagaccgaaacggcattggccttggccgagctgctg
tacggcggcgaccgattcatcacgacactcaacatggccgagtttcaggaaaaacacacg
gtttcgaggctcatcggcgcgcctccaggttatgtcggatttggcgaaggcggaatgctc
accgaggctgttcgacagaagccttactcggtggtgttgctcgatgaggtcgaaaaagcc
gatccggacgtgctgaatctgttctatcagatattcgacaaaggcctggccaacgatggc
gaagggcgggagatcgactttcgcaatacgctgattctgatgacgtcgaacctgggcagt
gagcgtatcagcgcgttgtgccaaaacggggcagcgccgagtgccgaacaactcgaagaa
gcgattcggccgctactcagcaggcatttcaaaccggcgttactggcccgtatgcgtgtg
gtgccatatttccccgtcagcggctcggtgctgcgcgagctggtggaaataaagctgggt
cgtctgggcgagcggctgcagcgtcgccagttgggcttcagttattgcacgcagcttgtt
gattaccttgtccagcgctgcacccacagcgacagcggtgcgcggctcatcgatcaattg
ctcgaactgcatctgatgcccgggttgtccgacggcttgctcgcggccatggccatcggc
gaacaaccgcggcaggttcacgccacgctcgatgaacaagcccgcgtaacgtgtgagttc
aagtga
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