Pseudomonas alvandae B21-020: LOY40_00635
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Entry
LOY40_00635 CDS
T08625
Symbol
tssK
Name
(GenBank) type VI secretion system baseplate subunit TssK
KO
K11893
type VI secretion system protein ImpJ
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
LOY40_00635 (tssK)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcas02044
]
LOY40_00635 (tssK)
Secretion system [BR:
pcas02044
]
Type VI secretion system
Imp/Vas secretion system core components
LOY40_00635 (tssK)
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GFIT
Motif
Pfam:
T6SS_VasE
XAC0095_dom
Motif
Other DBs
NCBI-ProteinID:
UVM72725
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Position
133691..135022
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AA seq
443 aa
AA seq
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MNHDKVIWQEGMLLRPQHLQHNDRYFDHQLKLRTRLLGGYAWGFLTLEIDLQFLNMGRLI
VSKASGVLPDGSFFELDGNAEPMVLEVPSNTCNTPIYLALPLVTGNRVESRRPEQADVLA
RYITYEMQVNDSNAADAFSSQISCGRPDVRLLLGEQQGDQAFVKLKVCEVLDTTPDGGIR
LDTDFVPAFIQAKSSGYLLSCLKEVIGMLGHRGESLAERILSNGKAGAVQVGDFMMLQLI
NRTELLLRHSLDLEQVHPETLYRTLLSLLGELATYSTDSKRPSFDHRYQHSDLGACFRSL
MQAIRQVLSMVLEQHAIELQLQARQYGISVSPMHDLSLLDSASFVLAASAHCDSEELRHR
LPSHLKIGSVERIRQLVNLHLPGIKIRPLPVAPRQIAFHANKTYFLLEPSVEDLAQVKRS
AGFAFHVSGEFAELALNFWAIRN
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaatcacgataaggtcatctggcaggaaggaatgttgctgcgcccgcaacatttgcag
cacaacgatcgttatttcgatcatcagctcaagcttcgcacacgcttgttgggtggttat
gcctggggcttcctgacactggaaatcgatctgcagtttctgaacatggggcggctgatc
gtcagcaaggcttcgggtgtcttgccagacggcagtttcttcgaattggacggcaacgcc
gagccgatggtcctggaagtgccgtccaacacctgcaacacgcccatctatctcgccctg
ccgctggtgaccggcaatcgggtcgagtctcgtcgtcccgagcaagccgatgtgctggcg
cgctatatcacctatgaaatgcaggtaaatgattccaacgccgcagacgctttcagcagt
cagatcagctgtggccgcccggatgtacgcttgctgctgggcgagcagcagggcgaccag
gctttcgtcaagttgaaggtgtgcgaagtccttgataccacgcctgatggtgggatcagg
ctcgatacggattttgtgcccgcgttcatccaggccaagtcatccggctacctgctgtcc
tgcctcaaggaagtcattggcatgcttggccaccggggcgaaagcctcgccgaacggatt
ctttccaacggcaaagcgggtgcggttcaagtcggcgatttcatgatgctgcaattgatc
aaccgtaccgaattgctgctgcgtcactctctggacctggaacaggttcaccctgaaacc
ctctatcgaacgctgctttctctgctaggcgagttggccacctattcaacagacagcaag
cgcccttcattcgatcaccgctaccaacacagcgatctgggtgcgtgctttcgaagcctc
atgcaggcaatccggcaggtgctgtcgatggtgctcgaacagcatgccattgagctgcaa
ttgcaggcacgccagtacggaatcagcgtttcgccgatgcatgacctttcactgctggac
tcggcttcgttcgtactggccgcgagcgcccattgtgacagcgaggagttgcgccatcgc
ttgccgtcgcatctcaagatcggttcggtggagcgcattcgccagttggtcaatttgcat
ttgccgggcatcaagatcaggcctttgcccgtggcgccgcggcagattgcgttccatgcc
aacaagacctatttcctccttgaacccagtgtcgaggaccttgcccaggtgaagcgttca
gcgggctttgcctttcatgtgtcgggtgaattcgctgagctggcactgaatttttgggcc
atcaggaactga
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