Pseudomonas alvandae B21-020: LOY40_00705
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Entry
LOY40_00705 CDS
T08625
Name
(GenBank) LysR family transcriptional regulator
KO
K27042
LysR family transcriptional regulator, trpBA operon transcriptional activator
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_00705
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
LysR family
LOY40_00705
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_30
HTH_20
MarR_2
HTH_23
HTH_11
HTH_24
HTH_IclR
I-HmuI_NUMOD-like
MarR
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-ProteinID:
UVM72738
LinkDB
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Position
complement(146342..147235)
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AA seq
297 aa
AA seq
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MSRDLPPLNALRAFEATARLNSVSQAAEQLHVTHGAVSRQLKALEEHLGVSLFSKEGRGL
KLTDAGARLRDASTEAFERLRTVCAELTQSTADAPFVLGCSGSLLARWFIPRLGRLNADL
PDLRLHLSAGEGDLDPRRPGLDALLVFAEPPWPADMQVYELTSERIGPVISPRYAEFTRL
CNAPASELLGEPLLHTTSRPQAWPIWARQNALGPQALKFGQGFEHLYYLLEAAVAGLGVA
IAPEPLVAEDLRAGRLVAPWGFSETSARLALWLPKRAADGRARQLAQWLRQELNPSN
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgagccgcgacctgccccccctcaacgccttgcgtgcctttgaagccaccgcccgcctg
aacagcgtaagccaggcggcagaacagctccacgtcacccatggcgccgtcagtcgtcaa
ttgaaggcgctggaagaacacttgggtgtcagcttgttcagcaaggaggggcgaggcctg
aaactcacagatgcaggcgcgcgtctgcgcgacgccagcaccgaagcgttcgagcgcctg
cgcaccgtttgcgccgaactgacgcaaagcacggcggacgccccgttcgtgctgggctgt
tcgggaagcttgttggcgcgttggttcattcctcgactcggcaggttgaatgccgatctg
ccggacctgcgcctgcacctctcagccggcgaaggcgacctcgacccgagacgcccgggt
ctggatgccctgctggtattcgccgaaccgccctggccggccgacatgcaagtatatgaa
ctgaccagcgagcggatcggcccggtgatcagcccgcgctatgccgaattcacccgtttg
tgcaacgcacccgccagcgaattgctgggcgagccgctcttgcacacaacctcccgcccc
caggcctggccaatttgggcacgacaaaacgcccttggaccccaggcgttgaaattcggg
caaggtttcgagcatttgtattatttactggaagcggccgtggccgggctcggcgtggca
attgcccccgagccgctggtcgcagaggacctgcgtgccggtcgcctggtcgcgccgtgg
ggtttcagtgaaacctcggcgcggctggcgttgtggctgcccaagcgcgccgcggacggg
cgcgcccggcaattggcgcaatggctcaggcaagagctgaacccatcgaactag
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