Pseudomonas alvandae B21-020: LOY40_00910
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Entry
LOY40_00910 CDS
T08625
Symbol
gabD
Name
(GenBank) NADP-dependent succinate-semialdehyde dehydrogenase
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00250
Alanine, aspartate and glutamate metabolism
pcas00310
Lysine degradation
pcas00350
Tyrosine metabolism
pcas00650
Butanoate metabolism
pcas00760
Nicotinate and nicotinamide metabolism
pcas01100
Metabolic pathways
pcas01120
Microbial metabolism in diverse environments
Module
pcas_M00957
Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
LOY40_00910 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
LOY40_00910 (gabD)
00310 Lysine degradation
LOY40_00910 (gabD)
00350 Tyrosine metabolism
LOY40_00910 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
LOY40_00910 (gabD)
Enzymes [BR:
pcas01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
LOY40_00910 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
LOY40_00910 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
LOY40_00910 (gabD)
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Motif
Pfam:
Aldedh
DUF1487
Motif
Other DBs
NCBI-ProteinID:
UVM72772
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Position
189744..191186
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AA seq
480 aa
AA seq
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MQLKDTQLFRQQAFIDGAWVDADNGQTIKVTNPATGEVLGTVPKMGAAETRRAIEAADKA
LPAWRALTAKERANKLRRWYELLIENQDDLGRLMTLEQGKPLAEAKGEIVYAASFIEWFA
EEAKRIYGDVIPGHQPDKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVIK
PASQTPFSALALVELAHRAGIPQGVLSVVTGSAGDIGGELTSNPTVRKLSFTGSTEIGRQ
LMAECAKDIKKVSLELGGNAPFIVFDDADLDKAVEGAIISKYRNNGQTCVCANRLYIQDS
VYDAFAEKLKAAVAKLKIGNGLEDGTTTGPLIDEKAVAKVQEHIADAVSKGATVLAGGKQ
MEGNFFEPTILTNVPKNAAVAKEETFGPLAPLFRFKDEAEVIAMSNDTEFGLASYFYARD
LGRVFRVAEALEYGMVGVNTGLISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYLCLGI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttaaagacacccagttgttccgccagcaagccttcatcgatggcgcttgggtc
gatgcggacaatggtcagacgatcaaggtcaccaacccggcaacgggcgaagtactgggc
acggtgccgaagatgggcgctgccgaaacccgtcgtgcgattgaagccgccgacaaggcg
ctgccggcctggcgtgcgttgaccgccaaagagcgcgccaacaagctgcgccgctggtac
gaattgctgatcgaaaaccaggacgacctgggtcgcctgatgaccctggagcagggcaag
ccgctggccgaagccaagggcgaaatcgtctacgccgcttcgtttatcgaatggttcgcc
gaagaagccaagcgcatctacggtgatgtgattcctggccaccagcccgacaagcgcctg
atcgtgatcaagcagccgatcggcgtgaccgccgccattaccccgtggaacttcccggca
gcgatgatcacccgcaaggccggcccggccctggctgccggttgcaccatggtcatcaag
cccgcttcgcaaaccccgttctcggccctggccctggttgaactggcgcaccgtgcgggt
attccgcaaggcgtgctgagcgtggtcaccggcagcgccggcgacatcggcggcgagctg
accagcaacccgaccgtgcgcaagctgtccttcaccggctcgaccgagatcggtcgccag
ctgatggccgaatgcgccaaggacatcaagaaagtctccctggaactgggcggcaacgcg
ccattcattgtgttcgacgacgccgacctggataaggccgtcgaaggcgcgatcatttcc
aagtaccgcaacaacggccagacctgcgtctgcgccaaccgcctgtacatccaggattcg
gtgtacgacgcgttcgccgaaaaactcaaggccgcagtggccaagctcaagatcggcaac
ggcctggaagacggcaccaccactggcccgttgatcgacgaaaaagccgtcgccaaggtc
caggaacacatcgccgatgccgtcagcaaaggcgccaccgtgctggcgggcggcaagcag
atggaaggcaacttcttcgagccgaccatcctgaccaacgtaccgaaaaacgccgccgtg
gcgaaggaagaaaccttcggcccgctggcgccgctgttccgcttcaaagacgaagccgaa
gtgatcgcgatgtccaacgacaccgagttcggcctggcttcgtacttctatgcccgtgac
ctgggccgtgtgttccgtgtggccgaagccctggaatacggcatggttggcgtcaacacc
gggttgatctccaacgaagtcgcgccgttcggcggcatcaaggcttcgggcctgggccgt
gaaggttccaagtacggcatcgaggactacctggaaatcaaatacctctgcctgggtatc
tga
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