KEGG   Pseudomonas alvandae B21-020: LOY40_01575
Entry
LOY40_01575       CDS       T08625                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pcas  Pseudomonas alvandae B21-020
Pathway
pcas02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LOY40_01575
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pcas02022]
    LOY40_01575
Two-component system [BR:pcas02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   LOY40_01575
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_50 AAA_2 HTH_8 FleQ AAA DUF6716 bpMoxR HTH_10 AAA_16
Other DBs
NCBI-ProteinID: UVM72897
LinkDB
Position
complement(356801..358189)
AA seq 462 aa
MTIDNQIEVVLIDDDPHLRQALSQTLDLAGLKILPLGEANGLAGQLPRDWPGVVVSDIRM
PGMDGLELLGQLHAQDPELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDSVRR
ALALRRLVLDNRSLRLALSDRHELSARLVGQSSPMLRLREQIGALAATRADVLILGETGA
GKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEFAN
GGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNQQIPLDIRIIAATKEDLRQAADQGR
FRADLYYRLNVAPLRIPPLRERGEDVLLLFQYFADEASARHGLPPHELQPAHRALLLRHG
WPGNVRELQNAAERFALGLELALDNSAPESHPGTPVEVVSGGLSEQVENFEKTLIAAELA
RPHSSVRSLAEALGIPRKTLHDKLRKHGLAFDSSHGPAEESD
NT seq 1389 nt   +upstreamnt  +downstreamnt
atgaccatcgacaaccagattgaggtggtgctgatcgacgacgatccccatctgcgtcag
gccttgagccagaccctcgacctggccgggctgaaaatcctgcccctgggcgaggccaat
ggcctggccgggcaactgccccgcgactggccgggcgtggtggtcagcgacattcgcatg
ccaggcatggacggcctggaactgctgggccaactgcacgcccaggatccggagctgccg
gtgctgctgatcaccggtcacggcgatgtgccgctcgccgtgcaggccatgcgtgctggc
gcgtacgacttcctggagaaaccgttcgccagcgatcatctgctcgacagcgttcgccga
gccctggccttgcgccgcctggtcctggacaaccgcagcctgcggctggccctgagcgac
cgtcacgaactcagcgcccggctggtgggccagtcatcgcccatgttgcgcctgcgcgag
cagatcggcgccttggcagcgacccgcgccgatgtgctgatcctcggtgaaaccggcgcc
ggcaaggaagtggtggcccgcgccctgcacgacctctccagccggcgcaacgggccattc
gtggccatcaatgccggcgccttggctgagtcggtggtggagagcgaattgttcggccac
gaacccggcgcctttaccggcgcgcagaaacgccgcatcggcaaattcgagttcgccaac
ggtggcacgttgttcctcgatgaaatcgaaagcatgagcctggacgtacaggtcaagttg
cttcgcctgctgcaagaacgcgtggtggaacggctgggtggcaatcagcagatcccgctg
gatatccgcatcattgccgcgaccaaggaagacctgcgccaggccgccgatcaggggcgg
ttccgcgccgacttgtattaccgcctgaacgtcgcgccactgcgcataccaccgttacgc
gaacgaggtgaagacgtgttgttgctgttccaatatttcgccgacgaggccagcgcccgc
cacggcctgccgccccacgagctgcaaccggcccatcgggcgctgctgctgcgccatggc
tggccgggcaacgtgcgcgagttgcagaacgccgccgaacgtttcgccttgggcctggaa
ttggccctggataacagcgcgccggaaagtcatccgggcacgccggtggaagtggtcagc
ggcggcttgagcgagcaggtggagaacttcgaaaagaccctgattgccgccgagctggcc
cgcccacacagttcggtacgcagccttgccgaagcattgggcatcccgcgcaagaccctg
cacgacaagctgcgcaagcatgggctggccttcgatagcagccatggcccggccgaagag
tctgattga

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