Pseudomonas alvandae B21-020: LOY40_01590
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Entry
LOY40_01590 CDS
T08625
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00521
Streptomycin biosynthesis
pcas00523
Polyketide sugar unit biosynthesis
pcas00541
Biosynthesis of various nucleotide sugars
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01250
Biosynthesis of nucleotide sugars
Module
pcas_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LOY40_01590 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOY40_01590 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOY40_01590 (rfbC)
Enzymes [BR:
pcas01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
LOY40_01590 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
UVM72900
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Position
complement(360909..361454)
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AA seq
181 aa
AA seq
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MNVIATRLPDVLIIEPKVFGDERGFFYESFNAQAFAEATGRVVQFVQDNHSRSAKGVLRG
LHYQIEHSQGKLVRVTEGEVLDVAVDIRRSSPTFGQWTSVRLSGQNHRQLWIPPGFAHGF
VVLSESADFLYKTTDYYAPSAERCIRWDDPELAIDWELQGTPILSAKDQAGSALREADLF
P
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttgaacgtcatcgccacccgcctgccggatgtcctgatcatcgagccgaaggtcttcggc
gacgaacgcggttttttctatgaaagcttcaacgcccaggcgttcgccgaagccactggc
cgcgtggtgcaattcgtccaggacaatcattcgcgttccgccaagggcgtgctgcgcggc
ctgcattaccagatcgaacattcccaggggaaactggtgcgcgtcaccgaaggtgaggtc
ctggacgttgcggtggacattcgccgcagctccccgactttcggccagtggacaagcgta
cgcctgtcgggacagaaccatcggcagctgtggattccgccaggattcgcccatggattc
gtggtactgagcgagtcagccgattttctctacaagaccaccgattactacgctccatca
gctgaacgctgcattcgctgggacgatccggaactggcgatcgactgggaactgcagggc
acgccgatcctgtctgccaaggatcaggccggcagcgcccttcgagaggccgacctgttc
ccatga
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