Pseudomonas alvandae B21-020: LOY40_01600
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Entry
LOY40_01600 CDS
T08625
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00521
Streptomycin biosynthesis
pcas00523
Polyketide sugar unit biosynthesis
pcas00525
Acarbose and validamycin biosynthesis
pcas00541
Biosynthesis of various nucleotide sugars
pcas01100
Metabolic pathways
pcas01110
Biosynthesis of secondary metabolites
pcas01250
Biosynthesis of nucleotide sugars
Module
pcas_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
LOY40_01600 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
LOY40_01600 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
LOY40_01600 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
LOY40_01600 (rfbB)
00525 Acarbose and validamycin biosynthesis
LOY40_01600 (rfbB)
Enzymes [BR:
pcas01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
LOY40_01600 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Motif
Other DBs
NCBI-ProteinID:
UVM72902
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All DBs
Position
complement(362323..363405)
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALIRHLIGHTDHQVLNLDKLTYAGNLESLSSIDHDSRYEFVQADIV
DQPTISAVLGRFKPDAIMHLAAESHVDRSIDGPADFIQTNIVGTYSLLEATRAYWQTLAE
PQKRAFRFHHISTDEVYGDLHGVDDLFTETTAYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIDVVRNICALLEELAPHKPAGVEHYADLITFVKDRPGHDLRY
AIDAGKIERELGWTPSETFETGLRKTVQWYLENLLWCRRVQDGSYQGERLGSLDNKDTIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcattaccggcggcgccggcttcatcggctcggctttaatacgacatttg
attggccatactgaccatcaggtcctgaacctcgacaaactgacctacgctggcaacctg
gagtcgctgagcagcatcgatcacgatagccgctacgagttcgtgcaggccgacatcgtc
gaccaaccgacgatcagcgcggtgctggggcgattcaaacctgacgccatcatgcacctg
gccgcagaatcccatgtggaccgctccatcgacggtccggcggatttcatccaaaccaat
atcgtcggcacctacagcctgctggaagccacccgtgcctattggcaaaccctggccgaa
ccgcaaaagcgggcgtttcgcttccaccacatttccaccgacgaagtgtatggcgacctg
catggcgtggatgacctgttcaccgaaaccaccgcctacgccccaagctcgccgtattcg
gccagcaaggcggcgtccgaccatctggtccgcgcctggcaacgcacgtatggcctgccc
gtgctgctgaccaactgctcgaataactacggaccctttcacttccccgaaaagctgatt
ccgctggtgatcctcaacgccctggccggtaaaccgctgccggtgtatggcgatgggctg
caagtgcgcgactggctgttcgtcgaggaccacgcccgggcgctgctcaaagtcgtcacc
gaaggggtggtcggtgagacctacaacattggcggccacaatgaacaaaagaacatcgac
gtggtgcgcaacatctgtgcgctgcttgaagaactggcgccgcacaagcccgcgggcgtc
gagcactacgccgacctgatcaccttcgtcaaggatcgtcccggccacgacctgcgctac
gccatcgatgccggcaagatcgaacgggagctgggctggacaccatcggaaaccttcgag
accggactgcgcaagaccgtgcagtggtacctcgaaaacctgctgtggtgccggcgcgtc
caggatggcagttatcagggcgagcgcctgggctcactcgacaacaaggatacgattgca
tga
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