KEGG   Pseudomonas alvandae B21-020: LOY40_01800
Entry
LOY40_01800       CDS       T08625                                 
Symbol
vapC
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
pcas  Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:pcas00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pcas03016]
    LOY40_01800 (vapC)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pcas02048]
    LOY40_01800 (vapC)
Transfer RNA biogenesis [BR:pcas03016]
 Prokaryotic type
  tRNA degradation factors
   LOY40_01800 (vapC)
Prokaryotic defense system [BR:pcas02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    LOY40_01800 (vapC)
SSDB
Motif
Pfam: PIN PIN_3 PIN_12
Other DBs
NCBI-ProteinID: UVM72937
LinkDB
Position
complement(402690..403106)
AA seq 138 aa
MIKFMLDTNICIFTIKNKPQVVREAFIRHHGQLCISAVTLMELIYGAEKSSAPEKNLSVI
EGFCARLEVLPFGYDAAAHTGMIRAELAKIGKPIGPYDQMIAGHARSLGLIVVTNNLKEF
ERVPGLRVEDWTPLALKP
NT seq 417 nt   +upstreamnt  +downstreamnt
atgatcaagttcatgctcgataccaacatttgtattttcaccatcaagaacaagccccag
gtcgttagagaagcgttcattcgtcatcacggccagctttgcatcagcgccgtcacgctt
atggaattgatatacggtgcagaaaaatcatccgcaccagagaaaaacctcagcgtcatt
gaagggttctgtgcacgacttgaggtcttaccttttggttatgacgctgcagcacacacc
ggaatgatccgggcggaattggccaaaataggcaaaccaatcggcccctacgaccaaatg
attgccggccacgcccgttccctcgggctgatcgtagtcaccaataatctgaaagagttt
gagagagtgcccggactgcgtgtcgaggattggactcccttggctttaaagccttga

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