Pseudomonas alvandae B21-020: LOY40_02250
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Entry
LOY40_02250 CDS
T08625
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOY40_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_02250
Enzymes [BR:
pcas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LOY40_02250
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LOY40_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
WHD_PriA
AAA_30
Zn_ribbon_6
HypA
iSirtuin
TrwB_AAD_bind
AAA_22
AAA_25
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
UVM73022
LinkDB
All DBs
Position
complement(500320..502539)
Genome browser
AA seq
739 aa
AA seq
DB search
MPDAILRLALPSPLRRLFDYRAPAGVLRAQLQPGMRLRVPFGRREMIGILVELTDHSEVP
VDKLKPALALLDATPPLPASLFKLCLWTAQYYQHSLGDTLSWALPVLLRQGEPAEARQER
FWSVAPGASLDDPRIARAPRQREALATLAQHPHGVAHQLLSKLMLSKDSLDLLLAKDLVQ
VEVRRHAPGERHEHWLAQPELPLNAEQRAACEAIRAGFDSYHAFLLAGVTGSGKTEVYLQ
LIRQTLEAGKQALVLIPEINLGPQTLARFEQRFNARIALVHSAVNDRERLEAWLAARDGE
ADIIIGTRSALFTPMKNPGLIIIDEEHDGSYKQQEGLRYHARDLALVRARQENIPIVLGS
ATPSLESLHNAYTGRYGLLRLNERAGGAKQPRFLRLDVKSRPLDSGISGPMQQAIGQTLA
AGQQVLVFLNRRGFAPTLLCHDCGWMSGCERCDARMTVHQRYGELRCHHCGHSERVPRNC
PQCGKVDLRPVGAGTERAEERLGILFPDYPVLRVDRDSTSRKDAMNNLFATIQKGQPCIL
VGTQMLAKGHHFPRVTLVSILDADGGLFSGDFRASERMAQLIVQVAGRAGRAEEPGKVII
QTHLADHPLLIQLTEQGYFAFAEQALSERRGAGLPPFAHLALLRAEAHKPGQAEGFLDEA
CSEAERLLAEQNLTGIELLGPVPAPMERRAGRYRAQLLLQANARAPLHRLLSAWLLALEQ
MPSGRAVRWSLDVDPVDLY
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgacgccatcctgcgcctcgccctgccctcgcccctgcgccgcctgttcgactac
cgcgctccggccggggtcctgcgcgcccagttgcagccgggcatgcgcctgcgggtgccg
ttcggccggcgggaaatgatcgggatcctggtggaactcaccgaccacagcgaagtgccg
gtggataaactcaagccagccctggccctgctcgatgccacgccgccgctgccggcgtcg
ctgttcaagttgtgcctgtggaccgcccagtattatcagcacagcctgggcgacaccctg
agttgggccctgccggtgctgttgcgccagggcgaaccggccgaggcacgccaggagcgg
ttctggtcggtggcaccaggcgcctcactggacgacccgcgtatcgcccgcgcaccgcgc
cagcgcgaagccctggcgaccttggcccagcatccccacggcgtggcccaccagttattg
agcaaactgatgctcagcaaggacagcctcgacctgctgctggccaaggacctggtccag
gtggaagttcgccgccatgccccaggcgagcgccacgaacactggctggcccagccagaa
ctgccgctaaacgccgaacaacgggccgcttgcgaggcgattcgcgcaggtttcgacagc
tatcacgcattcttgttggcgggtgtcaccggcagcggcaagaccgaggtctacctgcag
ctgatccgccagaccctggaagccggcaagcaggccctggtactgattccggaaatcaac
ctcggcccacaaacactggcgcgcttcgaacagcgcttcaatgcacggatcgccctggtg
cactcggcggtcaatgatcgcgaacgcctggaagcctggctagccgcccgggacggcgag
gccgatatcatcatcggcacccgctcggcgctgttcacgccgatgaaaaaccccggcctg
atcatcatcgacgaagagcacgacggttcctataaacagcaggaaggcctgcgctaccac
gcccgcgacctggcgctggtgcgggcccgacaagagaacattcccatcgtccttggctcg
gccacaccttccctggaaagcctgcacaacgcctacaccggtcgctacggcctgctgcgc
ctcaacgaacgggccggcggcgccaagcagccacgcttcctgcgcctggatgtgaaaagt
cgtccgctggacagcggcatctccggaccgatgcagcaagccatcggccagaccctggcc
gccgggcaacaggtgctggtctttctcaatcgccggggatttgccccgaccttgctgtgc
catgattgcggctggatgtccggttgcgaacgctgcgacgcgcggatgaccgtgcatcag
cgttacggcgagctgcgttgtcaccattgcgggcactccgaacgcgtgccgaggaactgc
ccgcagtgcgggaaagtggacttgcgtccggtgggcgccggcaccgagcgcgccgaagaa
cggctggggatcttgtttcccgactatcccgtgctacgcgtggatcgcgacagcacctcg
cgaaaagatgcgatgaacaatctgttcgccaccatccagaagggtcagccgtgcatcctg
gtgggcacgcaaatgctcgccaaggggcatcacttcccccgggtcacgctggtgtcgatc
ctggatgccgacggcgggctgttctccggtgatttccgggccagcgagcgcatggcgcag
ctgatcgtccaggtcgcaggccgcgccggacgcgccgaggaaccgggcaaagtgatcatc
cagactcacctggcggatcatccgctgctgatacaactgaccgagcagggctatttcgcc
tttgccgaacaggcgctgagcgaacgccgtggcgccgggttgccgccatttgcgcacttg
gcgctgttgcgcgccgaggctcataaaccggggcaggcggaaggtttcctggacgaagcg
tgcagtgaggcggaacggctgctggcggagcagaacctcaccggcatcgaactattgggc
ccggttccggctccgatggagcggcgggccgggcgttatcgcgcgcagcttctgttgcaa
gccaatgcccgggcgccgttgcatcggctgctgagtgcatggctgctggcgctggaacag
atgcccagcgggcgggcggtgcgctggtcgctggatgtggatccggtggatttgtattaa
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