Pseudomonas alvandae B21-020: LOY40_02775
Help
Entry
LOY40_02775 CDS
T08625
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas00730
Thiamine metabolism
pcas01100
Metabolic pathways
pcas01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
LOY40_02775 (thiC)
Enzymes [BR:
pcas01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
LOY40_02775 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
UVM73118
LinkDB
All DBs
Position
627043..628932
Genome browser
AA seq
629 aa
AA seq
DB search
MTTKSKNATNLSESAQVDQQSVQPFTRSQKIYVQGSRPDIRVPMREISLDVTPTDFGGEI
NAPVVVYDTSGPYTDPNVIIDVRKGLADVRSPWIEARGDTERLAGLSSNFGQERLADPEL
TQLRFAHVNNPRRAKPGANVSQMHYARKGIITAEMEYVAIRENMKLEVARAAGLLDQQHA
GHSFGASVPKVITPEFVRDEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGV
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPMTAKRVTGIVSRGGSIMAKWCLAH
HKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSIADANDEAQFGELETLGELTKIAWKH
DVQCMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAQGLAEQAERFKKEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgacgacaaaatcaaaaaacgcgaccaacctcagtgaatcggcccaggtcgatcagcaa
tcggtccagccctttacccgctcgcaaaaaatctacgtccagggcagccgcccggatatc
cgcgtgcccatgcgcgaaatcagcctcgacgtgacccccaccgacttcggcggcgagatc
aacgcgccggtagtggtctatgacacctcgggcccgtacaccgacccgaacgtgatcatt
gacgtgcgcaaaggcttggccgatgtgcgctcgccgtggatcgaagcccgtggcgacacc
gaacgcctggcgggcctgagctccaacttcggccaggagcgcctggctgatcccgagctg
acccagctgcgcttcgcccacgtgaacaacccgcgtcgcgccaagccgggcgccaacgtc
agccagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgtcgccatc
cgcgaaaacatgaagctggaagtcgcccgcgccgccggcctgctggaccagcaacacgcc
ggccacagcttcggcgccagcgtgccgaaagtcatcaccccggaattcgtgcgcgatgaa
atcgcccgtggccgcgcgatcatcccggccaacatcaaccacaccgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaacatcggcaacagtgcgctgggt
tcgtccatcgaagaagaagtggcgaagttgacctggggcatccgctggggttcggacacg
gtcatggacctgtccaccggcaagcacatccatgaaacccgcgagtggatcatccgcaac
tcgccggtaccgatcggcaccgtgccgatctaccaggccctggaaaaagtcggcggcgtg
gctgaagacctgacctgggagctgtttcgcgacacgctgatcgaacaggccgagcagggc
gtcgactacttcaccatccacgccggcgtgttgctgcgctatgtgccgatgaccgccaag
cgcgtcaccggtatcgtcagccgtggcggttcgatcatggccaagtggtgcctggcgcac
cacaaagagaacttcctctacacccacttcgaagacatctgcgaaatcatgaaggcctac
gacgtcagcttctcgctgggcgatggcctgcgtccgggctcgattgccgacgccaacgac
gaagcgcagttcggtgagctggaaaccctcggcgagctgaccaagatcgcctggaagcac
gacgtgcaatgcatgatcgaaggccccggccacgtgccgatgcagttgatcaaggagaac
atggacaagcagctcgagtgctgcgacgaggcgccgttctacaccctcggcccactgacc
accgacattgcgccgggctacgaccacatcacctccggcatcggtgcggcgatgatcggc
tggttcggttgcgccatgctctgctacgtcacgccgaaggagcacctcggcttgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgccgcgcatgctgccgatctg
gccaaagggcacccgggcgcgcagatccgcgacaacgccttgagcaaggcgcgtttcgag
ttccgttgggaagaccagttcaacctcggcctcgacccggacaccgcccgctcgtaccac
gacgaaaccctgccgaaggactcggccaaggtggcgcatttctgctcgatgtgcgggccg
aaattctgctcgatgaaaatcacccaggaagtgcgcgaatacgccgccaaccagcgcatt
gaagcggtggatgtggatgtcgcccagggtttggcggagcaggctgagcggttcaagaag
gaaggtagtcagctttacaagaaagtgtga
DBGET
integrated database retrieval system
