Pseudomonas alvandae B21-020: LOY40_04040
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Entry
LOY40_04040 CDS
T08625
Symbol
nusA
Name
(GenBank) transcription termination factor NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pcas03021
]
LOY40_04040 (nusA)
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_04040 (nusA)
Transcription machinery [BR:
pcas03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
LOY40_04040 (nusA)
Ribosome biogenesis [BR:
pcas03009
]
Prokaryotic type
rRNA transcription factors
LOY40_04040 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
KH_2
RNA_pol_A_CTD
DUF507
DUF2187
Motif
Other DBs
NCBI-ProteinID:
UVM73350
LinkDB
All DBs
Position
930771..932252
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AA seq
493 aa
AA seq
DB search
MSKEVLLVVESVSNEKGVPANVIFEALELALATATKKRFEDEVDLRVEINRHTGSYETFR
RWTVVEEADLDDPAIETWPSKVAETHPGAKVGDVVEEKIESIEFGRIAAQTAKQVIVQKV
REAERAQVVDAYRERLGEIISGTVKKVTRDNVIVDLGNNAEALLAREDIISRETFRVGVR
LRALLKEIRTENRGPQLILSRTAPEMLIELFRIEVPEIAEGLIEVMAASRDPGSRAKIAV
RSKDKRIDPQGACIGMRGSRVQAVSGELGGERVDIVLWDDNPAQFVINAMSPAEVAAIIV
DEDAHAMDIAVGADNLAQAIGRGGQNVRLASQLTGWTLNVMTESDIQAKQQAETGDILRN
FIEELEVDEELAQVLVDEGFTSLEEIAYVPVEEMLNIDGFDEEIVNELRARAKDRLLTKA
IATEEKLADAHPAEDLLSLEGMDKDLAMELAVRGVITREDLAEQSIDDLLDIDGIDDDRA
GKLIMAARAHWFE
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaagtactgctggttgttgagtcggtatccaatgaaaagggcgtaccggct
aacgttatttttgaagcgctggagctggccctggccactgctaccaagaagcggtttgaa
gacgaagttgatttgcgtgtggaaatcaatcgccacaccggttcctacgagactttccgt
cgctggacggttgtcgaggaagccgacctggacgacccggctatcgaaacctggccgagc
aaggttgcggaaacgcatccgggcgccaaggtcggtgatgtcgtcgaagaaaaaatcgag
tccattgaattcggtcgcatcgctgcacagactgccaagcaggtcattgtgcagaaagtt
cgcgaagccgagcgcgcgcaagtcgtcgacgcttaccgcgagcgcctgggagaaatcatc
tccggcaccgtgaaaaaagtcacccgcgacaatgtgatcgtcgacctgggcaacaacgcc
gaagcgttgctggctcgcgaagacatcatttctcgcgaaactttccgggttggtgtgcgt
ttgcgtgcgctgctcaaggaaatccgcaccgagaaccggggcccgcagctgatcctgtcg
cgtaccgcgccggaaatgctgatcgagttgttccgcatcgaagtgccggaaattgctgaa
ggcctgatcgaagtcatggccgcttcccgtgatccgggttcgcgcgccaagatcgcggtc
cgctccaaggacaagcgtatcgacccgcaaggtgcctgcatcggcatgcgtggttcgcgt
gtccaggccgtatccggcgagttgggcggcgagcgtgtggacatcgtcctgtgggacgac
aacccggctcagttcgtgatcaatgccatgtcgcctgctgaagtggcggcaattatcgtc
gacgaagatgcccatgccatggacatcgccgttggcgcagacaatctggctcaggccatc
ggtcgcggtggtcagaacgtgcgtctggcgagccaattgactggctggaccctgaacgtg
atgaccgaatcggacatccaggctaagcagcaagctgaaaccggcgacatcctgcgcaac
ttcatcgaagagcttgaagtcgatgaagaactggcgcaggtgctggtggatgaaggcttt
accagcctggaagagattgcctacgtaccggtggaggaaatgctcaacatcgacggcttt
gacgaggaaatcgtcaacgagcttcgcgctcgggccaaggatcgcttgttgaccaaagcc
atcgctactgaggaaaagctggcagacgcccatccggccgaagacctgctctcgcttgag
ggcatggacaaggatttggcgatggaactggcggtgcgcggcgtaattacccgcgaagac
ctggccgagcagtctattgacgacctgctcgacatcgacggcattgacgatgatcgtgcc
ggcaagttgatcatggccgcccgagcccactggttcgagtaa
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