Pseudomonas alvandae B21-020: LOY40_04055
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Entry
LOY40_04055 CDS
T08625
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pcas03016
]
LOY40_04055 (truB)
Enzymes [BR:
pcas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
LOY40_04055 (truB)
Transfer RNA biogenesis [BR:
pcas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
LOY40_04055 (truB)
Prokaryotic type
LOY40_04055 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
PUA_3
Motif
Other DBs
NCBI-ProteinID:
UVM73353
LinkDB
All DBs
Position
935364..936281
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AA seq
305 aa
AA seq
DB search
MAQVKRIRRNVSGIILLDKPLGFTSNAALQKVRWLLNAEKAGHTGSLDPLATGVLPLCFG
EATKFSQYLLDSDKGYETLAQLGKTTTTADAEGEVLLERPVTVGQADVEAVLPKFRGQIS
QIPPMYSALKRDGQPLYKLARAGEVVEREPRSVTIARLELLAFDGNTARLAVDCSKGTYI
RTLVEDIGEQLGCGAYVAELRRTQAGPFTLAQTVTLEELEAVHAEGGNEAVDRFLMPSDS
GLLDWPLLQFSEHSAFYWLNGQPVRAPDAPKFGMVRVQDHNGRFIGIGEVSEDGRIAPRR
LIRSE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
gtggctcaggtcaaacgtatccgtcgtaacgtcagcggcatcatcctgctcgacaagccg
ctgggattcacttccaacgcagccttgcagaaagtgcgctggttgctcaacgccgagaag
gccggtcacaccggcagcctcgatccgctggctactggcgtgctgccgctgtgctttggc
gaggcaaccaagttctcccagtacctgctcgattccgacaagggttatgaaaccctggcg
cagttgggcaagaccaccaccacggcggacgccgaaggtgaggttttgctggagcgcccg
gtgaccgttggtcaggcggatgtcgaggcggtgctgccgaaatttcgcggacaaatcagt
cagataccgccgatgtactccgccctcaagcgtgatggccagccgttgtacaaactggcc
cgtgcaggcgaagtagtggagcgtgaaccgcgttctgttactattgcgcgcttggaattg
ctggcctttgacggtaatactgcgcggctggcagtggattgcagcaaaggcacctatatc
cgaaccctggtggaggatattggcgagcagctcggttgtggcgcgtacgtggcagaattg
cgacggacccaggccgggcctttcacgttggcccagacggtcacgctggaagagctcgaa
gcggtgcatgccgaaggcggcaacgaagcggtcgaccgcttcctgatgccatcggacagc
ggcctgctggattggccgctcttgcagttctcggaacacagtgcgttctactggctcaac
ggccagccggtacgtgccccggatgcgccgaagttcggcatggtccgggtacaggatcac
aacggtcgcttcattggtatcggtgaagtgagcgaagacgggcgcattgcgccgcgtcga
ctgattcggtcggaatga
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