Pseudomonas alvandae B21-020: LOY40_05370
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Entry
LOY40_05370 CDS
T08625
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcas03032
]
LOY40_05370
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_05370
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_05370
DNA replication proteins [BR:
pcas03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LOY40_05370
Chromosome and associated proteins [BR:
pcas03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
LOY40_05370
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
LOY40_05370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
UVM73599
LinkDB
All DBs
Position
1226926..1227207
Genome browser
AA seq
93 aa
AA seq
DB search
MALTKDQLIADLAESVDAPKATVRALLDQLGQVVADQLENGGELTLPGVGKLKVTERPAR
TGRNPSTGAAIEIPAKKVIKLVVAKGLTDAVNK
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atggctcttactaaagaccaactgatcgctgatttggctgaatctgtagacgcaccaaaa
gctaccgtgcgtgctctgctggaccaactgggccaagtcgttgccgatcagctggaaaac
ggcggcgaactgaccttgccaggcgttggcaagctgaaagtcaccgagcgtcctgcccgc
accggtcgcaacccttcgactggcgcagccatcgaaatcccggccaagaaagtgatcaag
ctggttgtggccaaaggcctgaccgacgcggtcaacaagtaa
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