Pseudomonas alvandae B21-020: LOY40_05375
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Entry
LOY40_05375 CDS
T08625
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_05375 (rlmF)
Enzymes [BR:
pcas01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
LOY40_05375 (rlmF)
Ribosome biogenesis [BR:
pcas03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
LOY40_05375 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_31
UPF0020
Methyltransf_12
Methyltransf_25
PrmA
N6_Mtase
Motif
Other DBs
NCBI-ProteinID:
UVM73600
LinkDB
All DBs
Position
complement(1227398..1228423)
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AA seq
341 aa
AA seq
DB search
MTAPRTPKPARQKPKPATEAKAVAPREKASLHPRNRHQGRYDFPALIKSTPELAKFVIIN
PYGKESIDFASPEAVRVFNRALLKSFYGIAHWDIPADYLCPPVPGRADYVHFLADLLASH
NAGDPPRGAAVKVLDIGTGANCVYPLIGHSDYRWHFLGSEIDPTAIASAKAIVQSNGLNK
AIQLRQQANRKQILLGLLEDGERFDLTMCNPPFHASLDEATKGSQRKWRALGKADPKRKL
PVLNFGGQAAELWCEGGEARFVTQLINESAQVAGQVLWFSTLVSKASNLPAIQAALKKAG
ALHSQVVEMSQGQKQSRFVAWTFQTEAQQQAWRQARWVRKD
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccccccgcacacccaaaccagcccgccagaagcccaagcccgccaccgaggcc
aaagccgtggcaccgcgtgagaaggccagcctgcatccgcgcaaccgccaccagggtcgc
tatgatttcccggcgttgatcaagagcacaccggaactggcaaagttcgtgatcatcaac
ccctatggcaaggaaagcatcgacttcgccagccccgaagccgtgcgggtgttcaatcgg
gcgctgctcaaatccttttacggcatcgcccactgggatattcccgccgattacctgtgc
ccgccggtgccaggtcgtgcggactatgtgcactttctcgccgatttgctcgccagccac
aacgccggtgaccccccccgcggggcggcagtcaaggtgctggacatcggcaccggcgcc
aactgcgtttatccgttgatcggccacagcgactaccgctggcacttcctcggttcggag
atcgacccgaccgccattgcctcggccaaagccatcgtccagtccaatggcttgaacaag
gccatccagttgcgccagcaagccaaccgcaagcagatcctcctgggcctgttggaggac
ggcgaacggttcgacctgacgatgtgcaacccgccgttccacgcctccctggacgaagcc
accaagggcagccagcgcaagtggcgggcgttgggcaaggccgatccgaagcgcaagctg
ccggtgctgaattttggcggtcaggctgcggagttgtggtgcgagggtggcgaggcgcgg
ttcgtgacgcaattgatcaatgagagcgcacaagtggccgggcaggtgctgtggttcagc
actctggtgtcgaaggcgtcgaacttgccggcgattcaagccgcattgaaaaaggccggg
gcactgcacagccaggtggtggagatgtctcagggccagaagcagagtcgattcgtggcc
tggaccttccagaccgaggcccagcaacaggcgtggcgccaagcccgctgggttcgcaag
gattag
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integrated database retrieval system
