Pseudomonas canavaninivorans: LOY40_05420
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Entry
LOY40_05420 CDS
T08625
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pcas
Pseudomonas canavaninivorans
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pcas03019
]
LOY40_05420 (rnc)
03009 Ribosome biogenesis [BR:
pcas03009
]
LOY40_05420 (rnc)
03036 Chromosome and associated proteins [BR:
pcas03036
]
LOY40_05420 (rnc)
Enzymes [BR:
pcas01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
LOY40_05420 (rnc)
Messenger RNA biogenesis [BR:
pcas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LOY40_05420 (rnc)
Ribosome biogenesis [BR:
pcas03009
]
Eukaryotic type
90S particles
RNase
LOY40_05420 (rnc)
Prokaryotic type
rRNA processing factors
LOY40_05420 (rnc)
Chromosome and associated proteins [BR:
pcas03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
LOY40_05420 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
UVM73609
LinkDB
All DBs
Position
1240257..1240946
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AA seq
229 aa
AA seq
DB search
MSVSLSRLERQLGYTFKDQELMLLALTHRSFAGRNNERLEFLGDAILNFVAGEALFERFP
LAREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGELKSGGFRRESILADALEALIG
AIYLDSGMEMARERVLAWLTSEIDSLTLVDTNKDPKTRLQEFLQSRSCELPRYEVVDIQG
EPHCRTFFVECEVVLLNEKSRGQGVSRRIAEQVAAAAALIALGVENGND
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtttctctaagccgcctcgagcgtcagctcggctacactttcaaggatcaggag
ctgatgctcctggccctcactcaccgcagttttgccgggcgcaacaacgaacgcctggaa
ttcctcggcgatgccatcctcaatttcgtcgccggcgaggcgttgttcgaacgctttccc
ctggctcgcgaaggccaattgtcgcgtttgcgcgcacgattggtaaaaggtgagaccctg
gccgtactggcccgtggtttcgacctgggcgattatctacgcctggggtcgggtgagctg
aaaagcggcggtttccgtcgcgagtcgatcctcgccgatgccctggaagcattgattggc
gcgatctacctggattcgggcatggaaatggcgcgcgagcgcgtgctggcctggctgacg
tccgagatcgacagcctgacgctggttgacaccaacaaggatcccaagacccgcttgcag
gaattcctgcaatcgcgcagttgcgaactgccacgctatgaagtggtggatatccagggt
gagccgcattgccgaaccttcttcgtcgagtgcgaagtggtcctattgaatgaaaaaagc
cgaggccagggcgtcagccgtcgtattgccgaacaggtcgcggccgctgcagcactgatc
gccttgggcgtggagaatggcaatgactaa
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integrated database retrieval system
