Pseudomonas alvandae B21-020: LOY40_05430
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Entry
LOY40_05430 CDS
T08625
Symbol
recO
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LOY40_05430 (recO)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcas03400
]
LOY40_05430 (recO)
DNA repair and recombination proteins [BR:
pcas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LOY40_05430 (recO)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LOY40_05430 (recO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Motif
Other DBs
NCBI-ProteinID:
UVM73611
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All DBs
Position
1242010..1242693
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AA seq
227 aa
AA seq
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MSQPIAQPAYVLHSRAYRESSALVDFLTPQGRLRAVLRGARGKAGTLARPFVPLEVEFRG
RGELKNVGRMESNGVAAWLNGEALFSGLYLNELLIRLLPAEDPHPAVFDHYTATLLALAE
GRPLEPLLRSFEWRLLDDLGYGFSLDTDLHGQPIAADGLYRLQVDAGLEQVYQLQPGLFN
GVELLAMAEADWTAPGALAAAKRLMRQALAVHLGGRPLVSRELFRKP
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaacccatcgcccaacccgcctacgtcctccacagccgcgcctaccgcgaaagt
agcgccctggtggatttcctcacgccccaagggcggctgcgggcggtgttgcgtggggcg
cggggcaaggccgggacgctggcgcggccgttcgtgccgctggaggtcgagtttcgcggg
cggggcgagttgaagaacgtcgggcgcatggaaagcaacggcgtcgcggcctggctcaac
ggcgaggcgttgttcagcggcttgtacctcaatgagctgttgatccgcctgctgcccgcc
gaagatccccatcccgccgttttcgatcattacaccgcgacgctgctggccctggccgaa
ggccggccgctggagccgttgctgcgctccttcgaatggcgcctgctggacgacctgggc
tatggcttttccctcgacaccgacctgcacggccagcccatcgccgccgacgggctgtac
cgcttgcaagtggacgcgggcctggagcaggtctaccagttgcaaccggggctgttcaat
ggcgttgagctcttggccatggccgaagccgactggaccgcgcccggtgcgttggcggcc
gccaagcgtttgatgcgccaagcgctggcggttcacttgggtggccggccgctggtcagt
cgcgagctgtttcgcaagccctga
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