Pseudomonas alvandae B21-020: LOY40_05950
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Entry
LOY40_05950 CDS
T08625
Name
(GenBank) OprD family porin
KO
K18093
imipenem/basic amino acid-specific outer membrane pore [EC:3.4.21.-]
Organism
pcas
Pseudomonas alvandae B21-020
Pathway
pcas01501
beta-Lactam resistance
pcas02020
Two-component system
Module
pcas_M00745
Imipenem resistance, repression of porin OprD
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LOY40_05950
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LOY40_05950
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcas02000
]
LOY40_05950
01504 Antimicrobial resistance genes [BR:
pcas01504
]
LOY40_05950
Transporters [BR:
pcas02000
]
Other transporters
Pores ion channels [TC:
1
]
LOY40_05950
Antimicrobial resistance genes [BR:
pcas01504
]
Gene sets
beta-Lactam resistance modules
Imipenem resistance, repression of porin OprD [MD:
M00745
]
LOY40_05950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprD
Motif
Other DBs
NCBI-ProteinID:
UVM73709
LinkDB
All DBs
Position
complement(1380976..1382232)
Genome browser
AA seq
418 aa
AA seq
DB search
MRVMKWSMIALAVSASTSQFAMASSQEESKGFIEDQSLTVLTRALYMNRDFKNEPNTRQS
YREESGVAARAIYESGFTQGTVGVGVDGFAFGTVRIDGGSGRAGNGLFASDSDGNLEDTQ
SKVGGAVKFRLSDTVLKHGNQFVASPVFSTDDSRLLPEVATGTLITSKEIKGLELTAGHF
NAISSQTGMGDDGLGLTSADIAGATYQFTDNFVAGVAASDIEDHYKKKYINLNYTLPINE
DQSLNFDFNGYDSQDQGQKLSGDVDNRIWSLAAAYAIGAHKFTLAHQRSTGDTGYVYGTD
GNGTIFLANSIQYSDFNGQDERSWQARYDLNMKTYGVPGLSFMTRYVTGDNISTADGEAK
EHEWDFETKYVMQSGPAKDLSFRVRSAFYRTNTSYTTASGNRDNNDFRVIVEYPLSIL
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgatgaagtggagcatgatcgcactggctgtatcggccagtacctcgcagttc
gcaatggcgtcctctcaagaggaatccaagggttttattgaagatcagagcttgaccgtt
ctgacccgtgcgctgtacatgaaccgtgatttcaagaacgaaccaaacactcgtcaaagt
tatcgtgaagagtctggtgttgccgctcgtgccatttacgagtcgggcttcactcaaggc
accgttggtgtaggcgttgacggcttcgcatttggcaccgttcgcatcgatggcggcagc
ggtcgtgccggtaacggtctgttcgctagtgacagcgacggcaacctggaagacacacaa
tcgaaggtgggtggcgcggttaaattccgtctgtccgacaccgtgctgaaacacggtaac
cagttcgttgccagcccggttttctccactgacgacagccgtctgctgccggaagttgcc
actggtaccctgatcaccagtaaagaaatcaaaggcctggagctgaccgcaggtcatttc
aacgccatcagctcgcaaactggcatgggtgatgacggcctcggcctgacgtctgccgac
attgccggcgcaacctaccagttcaccgacaatttcgttgctggcgtagcggcttccgat
attgaagaccactataaaaagaaatacatcaacctgaactacaccttgccgatcaacgaa
gatcagtccctgaacttcgacttcaacggttatgacagccaggaccaaggccagaagctc
agcggcgacgttgacaaccgcatctggtccctcgcagcagcctatgccatcggtgcccac
aaattcaccctggctcaccagcgctccaccggtgataccggctacgtctacggcactgac
ggcaacggcactatcttcctcgccaactccatccagtactccgacttcaacggtcaggac
gagcgttcctggcaggctcgctatgacctgaacatgaaaacctacggcgttcctggcctg
agcttcatgactcgttacgttaccggtgacaacatttccaccgctgatggcgaagcaaaa
gagcacgaatgggacttcgaaaccaagtacgttatgcaaagcggtccagccaaagacctg
tcgttccgtgttcgtagcgctttctaccgcaccaacacctcttacaccaccgccagtggc
aaccgagacaacaacgacttccgcgtaatcgtcgaatacccactgagcatcttgtaa
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