Pseudomonas alvandae B21-020: LOY40_06130
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Entry
LOY40_06130 CDS
T08625
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K03721
transcriptional regulator of aroF, aroG, tyrA and aromatic amino acid transport
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_06130
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Other transcription factors
Others
LOY40_06130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
Sigma54_activ_2
HTH_50
AAA_5
Mg_chelatase
PAS
AAA_2
PAS_8
PAS_9
ACT
AAA
AAA_16
bpMoxR
ACT_4
Motif
Other DBs
NCBI-ProteinID:
UVM73741
LinkDB
All DBs
Position
complement(1415136..1416644)
Genome browser
AA seq
502 aa
AA seq
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MRIHVSFIDRVGITQEVLALLGGRNLNLDAVEMVPPNVYIDAPTLSPQVLDELREALFSV
RGVESVTVVDILPGQRRHLQLDALLAAMTDPVLALDSAGKVLLANPALIALYGREPAGQS
VAELFGDAALLDALLENGFRLPLREITLNGQTLLLDATPITDAGALLTLYQPNRIGERLS
ALHHDHAEGFDALLGESPAIRTLKARAQRVAALDAPLLIQGETGTGKELVARACHAISAR
HGAPFLALNCAALPENLAESELFGYAPGAFTGAQRGGKPGLMELANQGTVFLDEIGEMSP
YLQAKLLRFLNDGSFRRVGGDREIKVNVRILSATHRNLEKMVSEGSFREDLFYRLNVLNV
EVPPLRERGQDILLLARYFMQQACAQIQRPVCRLAPGTYPALLGNRWPGNVRQLQNVIFR
AAAICESSLVDIGDLDIAGTSVARQGDVEVESLEQAVESFEKHLLESLYVNYPSTRQLAS
RLQTSHTAIAHRLRKYGISNKP
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atgcgtatccacgtcagcttcatcgaccgcgtcggcatcacccaggaagtcctggccttg
ctcggtgggcgcaatctcaatctggatgcggtggagatggtgccgcccaacgtctacatc
gacgccccgaccctcagcccacaggtgctcgacgagttgcgcgaggcactgttcagtgtg
cgcggcgtggagtcggtcaccgtggtggacatcctgccgggccagcggcggcacttgcag
ctcgatgccttgcttgcggcgatgaccgacccggtgctggctctggacagcgccggcaag
gtgctgttggccaacccggcactgatcgccctgtacggacgcgaaccggccgggcaaagc
gtggccgagctgttcggcgacgccgcgctgctggacgccttgctggaaaacggctttcgc
ttgccgctgcgggaaatcaccctcaacggccagaccttgttgttggacgccacccccatc
accgatgccggcgcgctgttgacgctctaccagccgaaccgcatcggtgaacgcctgtcg
gcgctgcatcacgatcacgccgaaggctttgacgcattgctgggcgaatccccggcgatc
cgcaccctcaaggcgcgggcacaacgggtcgcggcgctggacgcgccgctgctgatccag
ggcgaaaccggcaccggcaaggaactggtggcccgggcttgccacgccatcagcgcccgc
cacggcgcaccgttcctggccctgaactgcgccgcgctgccggaaaacctggccgaaagc
gaactgtttggctacgcccccggtgccttcaccggagcccaacgcggtggcaagccgggg
ctgatggaactggcgaaccagggcacggtgttcctcgatgaaatcggcgagatgtcgccg
tatctgcaagccaagctgctgcgcttcttgaacgatggcagcttccgccgggtcggtggc
gaccgagagatcaaggtcaacgtgcggattctcagcgccacccaccgcaacctggagaag
atggtcagcgaaggctcgttccgcgaagacttgttctatcgcctgaacgtgctcaacgtc
gaagtcccaccgctgcgtgaacgtggccaggacatcctgctactggcgcgttatttcatg
cagcaggcctgcgcgcagatccagcgcccggtctgccgcctcgcccccggcacttacccg
gcgttgctgggcaaccgctggccgggcaacgtacggcaattgcagaacgtgatcttccgc
gccgccgccatctgcgaaagcagcctggtggacatcggcgacctggacatcgccggcacc
tccgtggcgcgccagggcgatgtggaagtcgaaagcctggaacaggccgtggaaagcttc
gagaagcacctgctcgaaagcctctacgtcaactacccctccacccgccagctcgccagc
cgcctgcaaacttcccacaccgcgattgcccatcggttgcgcaagtacgggatctccaac
aagccctag
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