Pseudomonas alvandae B21-020: LOY40_06545
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Entry
LOY40_06545 CDS
T08625
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K19736
TetR/AcrR family transcriptional regulator, regulator of autoinduction and epiphytic fitness
Organism
pcas
Pseudomonas alvandae B21-020
Brite
KEGG Orthology (KO) [BR:
pcas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pcas03000
]
LOY40_06545
Transcription factors [BR:
pcas03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
LOY40_06545
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
TetR_C_11
TetR_C_41
ExsD_M
TetR_C_24
Methyltrn_RNA_4
HTH_Tnp_1_2
HTH_22
LpxI_N
TetR_C_6
HTH_11
HTH_36
LacI
Motif
Other DBs
NCBI-ProteinID:
UVM73821
LinkDB
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Position
complement(1496558..1497166)
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AA seq
202 aa
AA seq
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MTAPQRLTERKREAILQAAIAEFRSSGFEVTSMDRIAATAGVSKRTVYNHFPSKEELFAE
ILNRLWNSITAEQDMPYRSQAPLRKQLQTLLQAKLQLLADENFLDLARIAIAATIHSPER
AQDMVSRMGEREEGLTAWIRQAQADGRLKPVEPAFAAQQMHGLLKTFAFWPQVSMGQPSL
AQEEQTRVIESALDMFLSRYQA
NT seq
609 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcaccgcaacgcctcaccgagcgaaaacgcgaagccatcctccaagccgcgatt
gctgaattccgtagcagcggtttcgaggtcaccagcatggacaggatcgcggcgactgcc
ggcgtatccaaacgcacggtgtacaaccatttcccgagcaaggaagaactgtttgccgaa
atcctgaatcggttatggaacagcatcactgcggaacaagacatgccctaccgctctcag
gcgccactacgcaagcaactgcaaacgctgttgcaggccaaactgcagctgctggcggac
gagaatttcctcgacctggcacgcattgccatcgccgcgacgattcactccccggagcga
gcacaagacatggtgtcgcgcatgggtgaacgcgaagaaggtctgacggcctggattcgc
caggcccaggccgatggtcggttgaagcccgttgagccagccttcgccgcccaacagatg
catgggctgctcaagacgttcgcgttctggccgcaggtttcaatgggccaaccgagcctg
gctcaggaggagcagacccgggtgatcgagtcggcgctcgatatgttcctgagtcgctac
caggcctga
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